Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0551 ATGAAATCAACCTCGGCAATGGTGCCATCATGGCTTGAAAATCTATTGTCGACAAGATTCTTCTCTCTGTGCAATGTGCACAAGAAACAATCTAGGAATGAATGCAAAATGTTCTGTCTCGATTGCAACAATGAAGCATATTGCGCACATTGCATAGCATATTCTCATGAAAAACACCGAGTTGTTCAGATAAGGAGGTCATCTTATCATGATGTTGTGAGAGTGAAAGAGATTGAAAATGCATTGAACATAACTGGGATTCAGACATATAGAATCAATGGTTACCAGGTCTTTTTCCTGATTACAAGGCCTATTAATCCAAATAATAAGAGCATAATTAGTGACAGAGTAAATCAATATTTGAATAATAATATATCTTTGAATGACTTTTTCTCTGTTTCAAGAGATTGGGATGAAGCCAAACTTAAGGAGTGGCTGCCGAACAACATTATAGATAGAATTATAGTCGTGGCACCTCCATCTCCTTGGAAAAAAGATGACCAAGTGATGTGA 513 0.3645 MKSTSAMVPSWLENLLSTRFFSLCNVHKKQSRNECKMFCLDCNNEAYCAHCIAYSHEKHRVVQIRRSSYHDVVRVKEIENALNITGIQTYRINGYQVFFLITRPINPNNKSIISDRVNQYLNNNISLNDFFSVSRDWDEAKLKEWLPNNIIDRIIVVAPPSPWKKDDQVM* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0551 170 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 7 110 - -
Ahy18g0551 170 Pfam PLATZ transcription factor 65 114 IPR006734 -
Ahy18g0551 170 SUPERFAMILY B-box zinc-binding domain 18 66 - -
Ahy18g0551 170 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 7 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0551 Ahy-Chr18 5382775 5388193 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Ahy18g0551 PLATZ 2.00E-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0551 - - ahf:114925755 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0551 18 5382775 5388193 Ahy18g0551 18 5382775 5388193 ECH