Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0523 ATGGCCAAGTTAAGTGCTAGAAGCATGAAGAAGAGTGCTACTAGTAACAGTTTCAGGTTTGTGGTGGAGAAACTAATTCATAAGAGTTTGTTAATGGGGAGCAACAACAAGAAGTCATCATCTTGTAATGATTGTGTGCCTGAGGATGTGAAAGAAGGACATTTTGCAGTGATTGCTGAGGGTGGTGGTGATGATGAGGAAGCTCCAAAGAGGTTGGTGATGCCACTGAGTTGTTTGAGAAACCCAGCATTCTTGAGGCTATTGGAGCAGGCTGAAGAGGAGTATGGCTTTGACCATGAAGGTGCACTCACCATTCCTTGCACCCCTTCTCAACTTCAAAGGATACTACTTCTTGAACAGCAACAAACTACCAACAACAACAACAACCACCTCTTCAACTTCTCAACTAATCACCTCCAATTCATCATCTCATAA 435 0.4299 MAKLSARSMKKSATSNSFRFVVEKLIHKSLLMGSNNKKSSSCNDCVPEDVKEGHFAVIAEGGGDDEEAPKRLVMPLSCLRNPAFLRLLEQAEEEYGFDHEGALTIPCTPSQLQRILLLEQQQTTNNNNNHLFNFSTNHLQFIIS* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0523 144 Pfam Auxin responsive protein 34 116 IPR003676 GO:0009733
Ahy18g0523 144 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 21 126 IPR003676 GO:0009733
Ahy18g0523 144 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE 21 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0523 Ahy-Chr18 5055662 5056429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0523 21 116 Calmodulin-binding Proteins AT3G43120 35.644 6.40e-12 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0523 - K14488 aip:107612303 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0523 18 5055662 5056429 Ahy18g0523 18 5055662 5056429 ECH
Ahy18g0523 18 5055662 5056429 Ahy8g1328 8 29290584 29291228 hybridization