Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0511 ATGGGTTCAGGTACCAATTTGGTTACCACGGTCATTGGGTTTGGGATGAGTGCCACTTTCATTGTGTTTATGTGCACAAGAATCAATTGTGGGAGGATAAGAGAGAGTGTTGAATCTCGCGTGATGTATGAGATTGAATCTAGGATTGACATAGAAAAGCCAAAACATCATGCTAATGACCTTGAATCCAAGCCTGTTATGCTTGATGCAATCCCCATTTTGAAGTTCAACCAAGAGACCTTCAGTGCTATAGAAGATACACAGTGTGTCATATGTTTGGCAGATTACAAAGAAAGAGAAATGTTACGCATCATGCCGAAATGCGATCACACATTTCATCTTTCTTGCATTGACATATGGCTGAGGAAACAATCCACTTGCCTGGTATGCCGTCTGCCGTTAAAAAACTCATCCGAGGCGAAACATGTTAGAACTGTTGCATTTACCATGAGCCAGCCTCTTGATGAGTCGCACAAGAATCGGCCGTTATCAATGTTATTGTTGATTTATAGGAATATCTTTAATGTCTTAGAA 534 0.4064 MGSGTNLVTTVIGFGMSATFIVFMCTRINCGRIRESVESRVMYEIESRIDIEKPKHHANDLESKPVMLDAIPILKFNQETFSAIEDTQCVICLADYKEREMLRIMPKCDHTFHLSCIDIWLRKQSTCLVCRLPLKNSSEAKHVRTVAFTMSQPLDESHKNRPLSMLLLIYRNIFNVLE 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0511 178 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 141 IPR013083 -
Ahy18g0511 178 PANTHER OS11G0150450 PROTEIN 1 158 - -
Ahy18g0511 178 CDD RING-H2_EL5_like 88 131 - -
Ahy18g0511 178 SMART ring_2 89 130 IPR001841 -
Ahy18g0511 178 PANTHER OS02G0676500 PROTEIN 1 158 - -
Ahy18g0511 178 SUPERFAMILY RING/U-box 77 137 - -
Ahy18g0511 178 Pfam Ring finger domain 88 131 IPR001841 -
Ahy18g0511 178 ProSiteProfiles Zinc finger RING-type profile. 89 131 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0511 Ahy-Chr18 4816928 4818376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0511 71 134 C3H Transcription Factor Family AT4G10160 50.000 5.35e-18 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0511 - - aip:107610428 337.421