Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0507 ATGAGTGGCTTAAGGCCTGATCATCAGTCTCCTCATCATGTAGCACAGCAAATTCGGCGTGATAAATTGAGAGTCCAGAACATTTCTCACCATCCACAATCACAGGATTTCCCCAACAATTTGGAACAATTCAACTTGGATCTTCTTCAAGTAAGGAATGTTAGAAATGCACACAACATGCTTGATGATGAGCCTCACCCACCACCACCAGGTGTTTATTCATCACAAGTGTCCAATTTCTTATCAACGCCTTTGAACCCTTTGGAGTATCACGAACTAGCTACTGTTGCAGCAGCTGAACAACCTAGTAGTAGTTGCAGTAGGGTAATGATGCATCAAAGTGAACTGCGCAGTTTGGGGAATTGGAGAAGCAGTGCTAACAGTAATCAAGGGTGTGATTGGTTTGTAAATTATGCATCAGGAAGCAGTTCTATGGCTAATAATGAAAGCAATAATCCCAACACTACTACTCATTTGGCTACTGAGATGAATAATGTGTCTTATAACCAGCACTATGAGAAGCCTAGTTGTTACAATGAATTCACAGATGTAATTGCTAATAGAGAAATTCAGAAGCAATTGGGAGGAGGAGTACTTCATCATCCTTCTTCTTCATCATCGATGTCGCCTTTTTATCAGAATACTTTGCAGGATATTGTCAAGTCCGCTTCTATAAGTGCGCAAGGATCAGACAACATGGCCTCATTGATGCAGCAACCTGGCCATGGAATTTGGGTTGGAGATGGTAGTGGACTTGACCTTCATCCAAGCTATGGAAACCAACCGAATCAATTTCGTTGCGCCGGTGGTAATCCTTGGACGAATCGAACAGTTGACAACGCCCTTCGATGGAATAGTAGTCCACTTGGTTTCATAGACAAGAAGGATGATGAACACTCTGGACGACCTCTAATGAGCAATTCGAATCCTCAGAACTTGTCTTTATCACTGTCATCAAATTCACAATCAAAGACTTCTGTGTCTCAATTTGAGCAAGTGTCTGCATCTGATGATCTTCAATGTAAGGATCCTCAGTACATGAAGTATGTAAGAGCTTTCATGAAGCCATCTATAGTTTCAAGAGATTCTGGGAAATCACCTCAAGATCCAGTGGGGGTGCCTTCAAGCACTAGCTATAGGAATGTAGGTCCCCTTGGCCCTTTCACTGGTTATGCTACTATTCTCAAGAGCTCAAGGTTCTTGAAATCAGCACAACAGTTATTGGATGAGTTCTGCCGTATATCTAGTCCAAGATTTTCAAAATCACGTGATGTCACACAAAGGTTATCTGGAGAAGCTAGTGCTTCTACTTCTACTGATGTTATCACTGTCGATAATCAAACTGAGGCTGCAGCAAAAGAAGGTAGCAATTCAGGTTCTTCATCTTCTATGTTCCATGGTGCAAATGAGAATAAAGCAGATTGGGGAACCGGGAGTGGTTCTTGTCTATCTCCTCGGCCAGATTACCAACAAAAGAAGGCAAGGCTCCTTTTCATGCAAGAGGAGGTTACAAGGAGATACAGGCAGTACCATCAACAAATGCAGATGGTTGTTTCATCCTTTGAGTCAGTAGCAGGTCTTAGTTCCGCCACTCCTTACATCTCCTTGGCTCTTAAGTCGGTATCGAGGCACTTCAAGTGCCTCAAAAATTCCATCTCAGATCAGCTCAAACATATAAGTGAAGTGTTGGGAGAGGATTTCTCAGTACCAAGAACCAGTACTTGTGGTAAAGATGACACCGCTAGCATGGGAAGATTAAGTTGCATGGACCAAAGCTTTCAAAAGAACAAATCTGGGAGGGGTGGCACCGGCCTTGTTGAACCCCAGCAACATGTCTGGAGGCCCCAAAGAGGCTTGCCGGAACATTCTGTGGCAATTCTCAAAGCATGGTTATTTGAGCATTTTCTTCACCCTTACCCCACAGACACTGATAAACACATGTTGGCAACACAAACAGGTCTTTCACGAAACCAGGTGTCGAATTGGTTCATCAATGCTCGAGTCCGAGTGTGGAAGCCAATGGTTGAGGAAATACACATGCTTGAAACAAAAGGCACAACAGGTGCCAACAAGAACAACAACAATCACCCTGGTACTGAAAATGAGAGAGCTTGTGTTAATGAAGATGGTTCCAGCAGCCAACAGCATAGAGTAATGGAGGGGACTCAAAGCAAGTTCGACATGCATTCTTTGATTCCTGAGAACCAACAGCAGTCTCACGAGTGTATGGAACTTGAAATGGAGTCAACAACCAATGAAGAACAATGGAGCCAAGAGAAGAGGTCTAAATTGGAATGTGAGATGAGTTCAACAAGCATGGATGAAGGGTCACTCATGATGGGTTTTATGCCATATAGCAGGCGTGATCATCAGGTTGGTGGGCTTGGATCTGTGTCACTAACATTGGGTCTAAGGCATGGTGTTGAAGCTGTTGTGCAAAACCAACAGCAACAACAACAGTTACAAGAGGAGCAGCTTAGGCGTCACTTTGGAGGACACATGATCCATGATTTTGTGGGCTGA 2523 0.4356 MSGLRPDHQSPHHVAQQIRRDKLRVQNISHHPQSQDFPNNLEQFNLDLLQVRNVRNAHNMLDDEPHPPPPGVYSSQVSNFLSTPLNPLEYHELATVAAAEQPSSSCSRVMMHQSELRSLGNWRSSANSNQGCDWFVNYASGSSSMANNESNNPNTTTHLATEMNNVSYNQHYEKPSCYNEFTDVIANREIQKQLGGGVLHHPSSSSSMSPFYQNTLQDIVKSASISAQGSDNMASLMQQPGHGIWVGDGSGLDLHPSYGNQPNQFRCAGGNPWTNRTVDNALRWNSSPLGFIDKKDDEHSGRPLMSNSNPQNLSLSLSSNSQSKTSVSQFEQVSASDDLQCKDPQYMKYVRAFMKPSIVSRDSGKSPQDPVGVPSSTSYRNVGPLGPFTGYATILKSSRFLKSAQQLLDEFCRISSPRFSKSRDVTQRLSGEASASTSTDVITVDNQTEAAAKEGSNSGSSSSMFHGANENKADWGTGSGSCLSPRPDYQQKKARLLFMQEEVTRRYRQYHQQMQMVVSSFESVAGLSSATPYISLALKSVSRHFKCLKNSISDQLKHISEVLGEDFSVPRTSTCGKDDTASMGRLSCMDQSFQKNKSGRGGTGLVEPQQHVWRPQRGLPEHSVAILKAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHMLETKGTTGANKNNNNHPGTENERACVNEDGSSSQQHRVMEGTQSKFDMHSLIPENQQQSHECMELEMESTTNEEQWSQEKRSKLECEMSSTSMDEGSLMMGFMPYSRRDHQVGGLGSVSLTLGLRHGVEAVVQNQQQQQQLQEEQLRRHFGGHMIHDFVG* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0507 840 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 66 808 - -
Ahy18g0507 840 SUPERFAMILY Homeodomain-like 614 680 IPR009057 -
Ahy18g0507 840 MobiDBLite consensus disorder prediction 303 320 - -
Ahy18g0507 840 MobiDBLite consensus disorder prediction 449 469 - -
Ahy18g0507 840 Pfam Homeobox KN domain 630 669 IPR008422 GO:0003677|GO:0006355
Ahy18g0507 840 Pfam Associated with HOX 394 553 IPR006563 -
Ahy18g0507 840 MobiDBLite consensus disorder prediction 359 378 - -
Ahy18g0507 840 SMART prehox3 389 554 IPR006563 -
Ahy18g0507 840 MobiDBLite consensus disorder prediction 293 320 - -
Ahy18g0507 840 MobiDBLite consensus disorder prediction 361 378 - -
Ahy18g0507 840 CDD homeodomain 613 674 IPR001356 GO:0003677
Ahy18g0507 840 Gene3D - 616 678 - -
Ahy18g0507 840 ProSiteProfiles 'Homeobox' domain profile. 610 673 IPR001356 GO:0003677
Ahy18g0507 840 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 8 66 808 - -
Ahy18g0507 840 SMART HOX_1 613 677 IPR001356 GO:0003677
Ahy18g0507 840 MobiDBLite consensus disorder prediction 685 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0507 Ahy-Chr18 4751255 4757603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0507 484 682 Homeobox Transcription Factor Family AT4G34610 54.774 2.72e-64 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Ahy18g0507 POX 1.10E-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0507 - - adu:107461750 1604.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0507 18 4751255 4757603 Ahy18g0507 18 4751255 4757603 ECH
Ahy18g0507 18 4751255 4757603 Ahy8g1313 8 29072648 29079123 hybridization
Ahy18g0507 18 4751255 4757603 Ahy13g0312 13 3137715 3145221 PCT
Ahy13g0312 13 3137715 3145221 Ahy18g0507 18 4751255 4757603 PCT