Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0502 ATGAAGTCTCAACTTAAAGTTGCAGCTGTTCTTGCTATTAACTTGCTATGGATTCAGCACTCATTTTGTGATGAACCTTCTGAGACTTACCTAAACAAGTGGAAATGTAGATGTTCTTCTTTCCAAAGGAACCATAGATACTCTCTTTCTAATTGTTCTCACTCATGTGATTGCCATTCAGATGCTGAAGATAGTGAATCCTCATGGACATGCATATGTGATACCAATGGATTCCCTAAAGTGGCAGCAGGTGGCCATAGCTCTAGTTGCTTTAAATCCTGCAACTGCACCTGGGGAAGCAAAAGCGTTGCATTAGGTTCCAAGAAACACATTTCAACAAGGACTGTGATAGTAGTTGTGCTTTTAATATGTGTTGTATGCAGCACTCTTGCATTTATTGCCTCAGTTCTATACTATGTCTGCAGAAGAGACAGCTGTTCAATTCAATCACCAATGGTTTTATCAGATAAAGAAACAAGTTACAATAGTACCTCCAACTTAATTAGTCATAGAACATTTTCAGTTCCAGAAACAAAAGCTGCTATTCATTTTCCAGGATGCTTTCAGAAGGCCTCTTTCCTGTTTGGGAGCCATAGAGAAACTTTTCATGGAAGTATCATTCGATTTTCGTTCTCTGAGCTGGAAAATGCCACTGGAAACTTCTCAACTTCCAACATAATTGGACTTGGTGGATGTAGTTATGTATACCGCGGACGACTTAAAGATGGAAGTAACGTGGCAGTTAAGCGATTAAAAGATGAAGGAGGACCTGAAGCAGACACTGAATTTTTCACTGAGATTGAACTATTGTCTAGGCTTCATCATTGTCATCTGGTGCCATTGCTTGGATACTGCTCAGAATTAAAAGGGAAAAATGTTCATAGGTTACTAGTGTTTGAGTACATGCCTAATGGGAATTTGAGGGACCGTTTGGATGGAGTTTTTGGAAAGAACATGGGTTGGTCTACTCGGGTAAATATCGCATTGGGAGCTGCCAGGGGTTTGGAGTATCTCCATGAAGCAGCTGCTCCAAGAATTCTGCATAGAGATGTCAAATCAACCAACATTCTTCTTGATGAAAATTGGCATGCAAAAATAACTGATCTTGGTATGGCTAAAAACTTGATATCTGATGACATACCCAGTTGTCCTGGCTCTCCAGAGAGAATGCAGGGCACATTCGGGTATTTCGCACCCGAGTATGCAATTGTTGGGAGAGCTTCTCTTGAATCTGATGTATTTAGTTTTGGTGTGGTTCTTCTTGAGCTTATCAGTGGCCAGCAACCAATCCTTAGATCAGCAGGAAGAGAAGAAAGCCTTGTTATATGGGCCACTCCTCTGTTGCAAGATAGCAGGAGACTAATCACAGAGTTGATCGATCCGCGATTGAAAGGAAACTTCCCAGAAGAAGAGGTGAAGGTAATGGCATACTTAGCAAAAGAGTGTTTGCTGTTGGATCCTGACACAAGACCAACCATGAGTGAGGTTGTTCAAATTCTTTCAAGTATTTCCCCTGGAAAATCTAGAAGAAGAATAAGCATTCCACTTAGCCTTTTTCAGGAATCAGAGGATGCAGAGAAGGCAAGGCAAGCTTCTTCATCGGCCAGATTAGCTTATTGTAATTTCATGTCACAAGATACTGAAAACAATCTTCATGTTGTTGGGAATGAAAATGAAAATGTAGATGCATTTTCAACTGAGTATATGGAGAGTTTGATCCTCTTGACTTCAAAAATTCCTGAGAGCTGGCATGCATCAGAAGAGGAAATGGTAGACCTAACTGAACCGAGGTTCGAATCGTTTTCCTTGATGACATTAACATAG 1824 0.4062 MKSQLKVAAVLAINLLWIQHSFCDEPSETYLNKWKCRCSSFQRNHRYSLSNCSHSCDCHSDAEDSESSWTCICDTNGFPKVAAGGHSSSCFKSCNCTWGSKSVALGSKKHISTRTVIVVVLLICVVCSTLAFIASVLYYVCRRDSCSIQSPMVLSDKETSYNSTSNLISHRTFSVPETKAAIHFPGCFQKASFLFGSHRETFHGSIIRFSFSELENATGNFSTSNIIGLGGCSYVYRGRLKDGSNVAVKRLKDEGGPEADTEFFTEIELLSRLHHCHLVPLLGYCSELKGKNVHRLLVFEYMPNGNLRDRLDGVFGKNMGWSTRVNIALGAARGLEYLHEAAAPRILHRDVKSTNILLDENWHAKITDLGMAKNLISDDIPSCPGSPERMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGQQPILRSAGREESLVIWATPLLQDSRRLITELIDPRLKGNFPEEEVKVMAYLAKECLLLDPDTRPTMSEVVQILSSISPGKSRRRISIPLSLFQESEDAEKARQASSSARLAYCNFMSQDTENNLHVVGNENENVDAFSTEYMESLILLTSKIPESWHASEEEMVDLTEPRFESFSLMTLT* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0502 607 CDD STKc_IRAK 227 503 - -
Ahy18g0502 607 PANTHER OS01G0253100 PROTEIN 2 603 IPR045271 GO:0004714|GO:0006468
Ahy18g0502 607 Gene3D Phosphorylase Kinase; domain 1 196 301 - -
Ahy18g0502 607 SUPERFAMILY Protein kinase-like (PK-like) 201 500 IPR011009 -
Ahy18g0502 607 Pfam Protein kinase domain 222 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g0502 607 Gene3D Transferase(Phosphotransferase) domain 1 302 514 - -
Ahy18g0502 607 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN 2 603 - -
Ahy18g0502 607 SMART serkin_6 221 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g0502 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 346 358 IPR008271 GO:0004672|GO:0006468
Ahy18g0502 607 ProSiteProfiles Protein kinase domain profile. 221 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0502 Ahy-Chr18 4627777 4631478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0502 4 603 Receptor kinase-like Gene Family AT2G28250 51.316 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Ahy18g0502 Pkinase 2.40E-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0502 - - gmx:100499641 882.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0502 18 4627777 4631478 Ahy18g0502 18 4627777 4631478 ECH
Ahy18g0502 18 4627777 4631478 Ahy8g1308 8 28923697 28927432 hybridization
Ahy18g0502 18 4627777 4631478 Ahy13g0322 13 3256722 3263886 PCT
Ahy13g0322 13 3256722 3263886 Ahy18g0502 18 4627777 4631478 PCT