Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0485 ATGCGATTGCTATGGGGGATAAAGTTGCCCATACTCATATTCATTCAACTTTTATGTCTCAGCAAATTATATGGTTCACTTGGCAGATCACAGCAATTGGGATGCAGCATTGTGAAGTATCCGTGTCGAATGCAATGGCCGTGTCGCCTTAACTGCTATAAACTAAAAGATCCAGGTGGAATAGCAGCAAAGGTGGATGGAAACAATGACATTCCAACACTTACACCTGTTCAAGAAGCTCAAGTTAACAGGCAGGGTGAAAGAAGGGCTGCTGCCGCCACAGTTGGTGGCGTTGCTGCCGCCTTATTGGTGATTATCATTGTGGTAATTGTGTATATCTGCTTGATGCGTCTTAAAAGAATCATGAGGCAAACATCTGAGAGTGCTTCTTCTATGCCATCTCCCACAGTTGAGATGGGAAGAAGCAACAACTCTCTGCAAGTAAACGAATTGTGTCCATATTATGCACACAATGCAAGGCAGTTAACAATTTTAGAACTAGAACAAGCTACAAGATGTTTCAATCAAAGTAATATTGTAGGTGAAGATAGATTTGGTTTGGTTTACCAGGGCTTGCTTCAAGATGGATCTATTGTGGCTATAAAGAGGAGAATGTCTTCTCTAACGACGAATTTCATCGGCGAGGTGAGGAAGATATCATGCATTCATCATATGAATCTTGTGAAGCTTATAGGCTACTATGAAGATGGCTATCAACAATTACTAGTGTATGAACATCTCCCTAATGGCCATGTAGGGAATCACCTATATGATAGTGAAGGTTTGCCTATTGGAAAGTTAGACTTGTGGAGGAGGTTATCCATTGCTTTAGGAGCATCCAAAGGACTGGAACATCTTCACAGTTTGGATCCTCCTTTGGTTCACACCAATTTCAGAACTCAAAATGTTTTTTTGGATGGAAGTTACACTGCCAAGGTTTCGGATTACGGATTCGGCACATTGCAAAGAGAAGTTGATCAGGCTGCAGCCTCATCTTCATGCATAGATTGCTTTCTTGACCCAGAGTTGAGTTCACCAGAAAACTATACACAGCAGAGTGATGTATACAGCTTTGGAGTCTTCTTACTGGAGTTGATTAGTGGTTGTGAAGTTTATAACAGAAACATGTCAACCTTAGAAGAAAACCTAGTATTCCAGGCAAAGGCAAAGGCAAAGGATAGTGATGGGTTGGAGAAGTTGGTTGATGTAACATTAGGAGAGCATGAAAAAGATGGTGCAAGGAGAATGGTGAGGTTGGCATTATTATGCATAAGCAAGAGTTATAGAAGGCCATCAATGGGGCAAATAGTGCAAGAGCTAGAGCGGATTCAAAGAGAGATTGCTCCTTTTTATTCACAAGTCAATGAGGACATTGGTGTCGTCACTCTTGGGAGTGAACTTTTCCAATAA 1410 0.4135 MRLLWGIKLPILIFIQLLCLSKLYGSLGRSQQLGCSIVKYPCRMQWPCRLNCYKLKDPGGIAAKVDGNNDIPTLTPVQEAQVNRQGERRAAAATVGGVAAALLVIIIVVIVYICLMRLKRIMRQTSESASSMPSPTVEMGRSNNSLQVNELCPYYAHNARQLTILELEQATRCFNQSNIVGEDRFGLVYQGLLQDGSIVAIKRRMSSLTTNFIGEVRKISCIHHMNLVKLIGYYEDGYQQLLVYEHLPNGHVGNHLYDSEGLPIGKLDLWRRLSIALGASKGLEHLHSLDPPLVHTNFRTQNVFLDGSYTAKVSDYGFGTLQREVDQAAASSSCIDCFLDPELSSPENYTQQSDVYSFGVFLLELISGCEVYNRNMSTLEENLVFQAKAKAKDSDGLEKLVDVTLGEHEKDGARRMVRLALLCISKSYRRPSMGQIVQELERIQREIAPFYSQVNEDIGVVTLGSELFQ* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0485 469 PANTHER PROTEIN KINASE APK1A, CHLOROPLASTIC-LIKE 60 467 - -
Ahy18g0485 469 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 60 467 - -
Ahy18g0485 469 Gene3D Phosphorylase Kinase; domain 1 136 246 - -
Ahy18g0485 469 SUPERFAMILY Protein kinase-like (PK-like) 154 448 IPR011009 -
Ahy18g0485 469 Gene3D Transferase(Phosphotransferase) domain 1 247 460 - -
Ahy18g0485 469 Pfam Protein tyrosine and serine/threonine kinase 177 388 IPR001245 GO:0004672|GO:0006468
Ahy18g0485 469 ProSiteProfiles Protein kinase domain profile. 174 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0485 Ahy-Chr18 4352713 4356048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0485 98 447 Receptor kinase-like Gene Family AT4G02010 35.083 1.42e-53 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Ahy18g0485 PK_Tyr_Ser-Thr 3.00E-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0485 - - gmx:100815066 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0485 18 4352713 4356048 Ahy18g0485 18 4352713 4356048 ECH
Ahy18g0485 18 4352713 4356048 Ahy8g1292 8 28566615 28570082 hybridization