Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0469 ATGGAAATTGATCTGAACCATGCAGTGACTGAGGTTGAAAAGAATGCAACTTGCAATGGTGGCTGTCACAAAGAACAAGCAACTGCTTCTTGTGTGTGCTGTGTGCCATCATCATCATCATCATCATCCTCATCCTCTGCTGTGTCTTCTTCTTCGTATCTGGAGCTATGGCATGCTTGTGCTGGCCCTCTTACTTCTCTCCCAAAGAAGGGGAATGTGGTTGTCTACTTCCCACAAGGGCACTTAGAGCAAGCTGCATCTTTCTCTCCCTTCACACCATTGGAGATTCCAACACATGATCTTCAACCACAGATCTTCTGTAGAGTTGTCAATGTCCAACTACTTGCCAATAAGGAGAATGATGAGGTTTACACACAGGTCACTTTGCTTCCCCAAGCTGAGTTGGCAGGGATGGGGAAAGAGCTTCTTGAGGAATTGGGAGCTGATGAAGAAGGAAATGGAAGAACACCTACAAAAACAACACCTCACATGTTCTGCAAGACACTCACAGCCTCTGATACAAGCACTCATGGTGGTTTCTCTGTTCCTCGTAGAGCTGCTGAAGATTGTTTTCCTCCTTTGGATTATAAGCAGCAGAGACCCTCTCAAGAGCTTATTGCAAAAGACCTGCATGGTGTGGAGTGGAAATTTCGCCATATTTACAGAGGTCAGCCGAGGCGGCATCTACTCACTACCGGATGGAGTATTTTCGTTAGCCAAAAGAATCTTGTGTCCGGTGATGCTGTGCTTTTCCTAAGGGGTGAAAATGGAGAATTGAGATTGGGAATCAGAAGAGCTGTTCGACCAAGAAATGGTCTTCCTGAGTCTATTGTTGGTAACCAGAGTTGTTATCCCAATTTCCTTTCTTCTGTGGCTAATGCTATATCAGCAAAAAGCATGTTTCATGTTTTCTACAGTCCAAGGGCAAGTCATGCAGATTTTGTTGTATCCTATCAAAAGTATGCCAAAAGCATCAAGAATCCGGTGACCATTGGCACAAGATTCAAAATGAAATTTGAAATGGATGAATCACCTGAAAGAAGGTGTACTAGTGGTATAGTGACTGGAATGAGTGATTTGGATCCATACAGATGGCCTAAATCAAAATGGAGGTGCTTAATGGTCAGATGGGATGAGGATATGGAGACTAATCATCAGGATCGAGTATCTCCATGGGAGATCGATCCTTCGGCTTCTCTCCCTCCATTGAGTATGCAGTGTTCCCCAAGGCTGAAGAAACTGCGGACAGGTCTGCAGGCTGCATCATCCAGTCACCTCATCACTGGAGGCACTGGGTTTATGGACTTGGAGGAGTCTGTAAGATCGCCCAAGGTCTTGCAAGGTCAAGAAAATACAGGTTTTATGTCCCTATATTTTGGACGTGACACAGTAACTAAGCAGCCAGGTTTTGAGATCAGTTCTCCCAATCATCCGAATCTTGCATCGGCCGGAGCAAGAAAGATGACTGCTGCTGAGCTTATGAGGGTTCACCCTCCTACATATGCAGGCTTCGTGGAACCTAATAATAGGTTTCCGAGGGTCTTGCAAGGTCAAGAAATATGTCCACTAAGGTCCCTGACAGGGAAGGTTGATATAAACCTCGGTGCTTGGGGTAATAAACCAAGTAGTGCAAGTTGCACAACTTTCAACCTGCATCAAGCTACCAGACCAAAATTTGATTCTTTAGGATCAGAAGTCCTTCAAACTGCATATTTTCCTTATGGTGATATTCACAAAGCTGGTCATGGTAGCAGCATGTTGTGCTCTAAACCGTCGAGTTTCCAAAGAGATATTGCGCCATTTAACACTCCTCTGACTCAGGCAGGGATAATTAGAAATGAAATTGGAAGGTCTGGCCCTTCAATCATGCATGAGCAGAAGCTGCCGGAGAATGTTTCCGTGGTTTCTTCTTTAGGGGGAAACAGCATGAGGATGCCAGTTCCGGATGAAGAGAATCTCAAGGGGAAGATAAATGGATGTAAACTATTTGGAGTTGCCTTGTCTGGAGAAACTACCACCCAAAACGCTAAAAGGAGCTGCACAAAGGTTCACAAGCAAGGCAGCTTAGTTGGAAGAGCTATCGATCTCTCAAGATTGAGCAGCTACACTGATCTCTTCACTGAACTTGAGAGACTCTTTGGCATGGAAGGCCTACTAAGAGATCCTGATAAGGGATGGAGGATCCTGTACACCGACAGCGAAAATGACATCATGGTTGTCGGGGATGACCCATGGCATGAGTTCTGCAATGTGGTATCAAAGATTCATATATATACACAAGAGGAAGTGGAGAAGATGACAATTGGGATTATCAGTGATGATACACAGAGCTGTTTGGAACAGGCACCAGTCAATATGGAGGCTTCTAAGTCTTCCTCGGTGGGTCAACCAGATTCTTCCCCAACAGTAGTTAGAGTCTAG 2421 0.4494 MEIDLNHAVTEVEKNATCNGGCHKEQATASCVCCVPSSSSSSSSSSAVSSSSYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQAASFSPFTPLEIPTHDLQPQIFCRVVNVQLLANKENDEVYTQVTLLPQAELAGMGKELLEELGADEEGNGRTPTKTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNGLPESIVGNQSCYPNFLSSVANAISAKSMFHVFYSPRASHADFVVSYQKYAKSIKNPVTIGTRFKMKFEMDESPERRCTSGIVTGMSDLDPYRWPKSKWRCLMVRWDEDMETNHQDRVSPWEIDPSASLPPLSMQCSPRLKKLRTGLQAASSSHLITGGTGFMDLEESVRSPKVLQGQENTGFMSLYFGRDTVTKQPGFEISSPNHPNLASAGARKMTAAELMRVHPPTYAGFVEPNNRFPRVLQGQEICPLRSLTGKVDINLGAWGNKPSSASCTTFNLHQATRPKFDSLGSEVLQTAYFPYGDIHKAGHGSSMLCSKPSSFQRDIAPFNTPLTQAGIIRNEIGRSGPSIMHEQKLPENVSVVSSLGGNSMRMPVPDEENLKGKINGCKLFGVALSGETTTQNAKRSCTKVHKQGSLVGRAIDLSRLSSYTDLFTELERLFGMEGLLRDPDKGWRILYTDSENDIMVVGDDPWHEFCNVVSKIHIYTQEEVEKMTIGIISDDTQSCLEQAPVNMEASKSSSVGQPDSSPTVVRV* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0469 806 SMART B3_2 165 267 IPR003340 GO:0003677
Ahy18g0469 806 Gene3D - 673 767 - -
Ahy18g0469 806 CDD B3_DNA 163 265 IPR003340 GO:0003677
Ahy18g0469 806 Gene3D - 163 267 IPR015300 -
Ahy18g0469 806 SUPERFAMILY DNA-binding pseudobarrel domain 157 276 IPR015300 -
Ahy18g0469 806 ProSiteProfiles PB1 domain profile. 678 762 IPR000270 GO:0005515
Ahy18g0469 806 Pfam Auxin response factor 291 373 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Ahy18g0469 806 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 26 794 IPR044835 GO:0003677|GO:0006355|GO:0009725
Ahy18g0469 806 ProSiteProfiles B3 DNA-binding domain profile. 165 267 IPR003340 GO:0003677
Ahy18g0469 806 Gene3D - 329 401 - -
Ahy18g0469 806 SUPERFAMILY CAD & PB1 domains 680 757 - -
Ahy18g0469 806 MobiDBLite consensus disorder prediction 785 806 - -
Ahy18g0469 806 Pfam B3 DNA binding domain 165 266 IPR003340 GO:0003677
Ahy18g0469 806 PANTHER AUXIN RESPONSE FACTOR 26 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0469 Ahy-Chr18 4161061 4166386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0469 49 806 B3 DNA Binding Superfamily AT5G60450 60.598 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Ahy18g0469 B3 1.90E-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0469 - - ahf:112706773 1597.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0469 18 4161061 4166386 Ahy18g0469 18 4161061 4166386 ECH
Ahy18g0469 18 4161061 4166386 Ahy8g1276 8 28411099 28416526 hybridization
Ahy18g0469 18 4161061 4166386 Ahy13g0368 13 3675500 3680384 PCT
Ahy13g0368 13 3675500 3680384 Ahy18g0469 18 4161061 4166386 PCT