Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0468 ATGGACTTGGTATCTAGTTGTAAGGAAAAATTGAATTCTTTTCGCATAAAAGAGCTCAAAGATGTGCTCACTCAATTGGGACTTTCAAAGCAGGGAAAGAAGCAGGATCTCATTGATAGGATATTGTCTATTCTCTCAGATGAACAGGCTTCCAAAATCTGGGCTAAGAAGAATGCTATTGGGAAAGAACAGGTGGCAAAATTAGTGGATGATACCTTTAGAAAATTGCAGGTATCTGGGGCCATTGATTTAGCATCAAAGGGACAGGGTTCCTCCCCAGATGTCAGTAATGTTAAAATTAAAGGTGAAGTTGATGAGATCTTTCAGGAAGAAACAAAGATTCGGTGTCTTTGTGGTAGTTCGTTGGAAACTGATCCACTGATAAAGTGTGAGGATACAAGATGCCATGTGTGGCAGCACATTAACTGTGTTATTATTCCAGAGAAACCTATGGAACCAATTCCACCCCTTCCTCAAAAATTTTACTGTGAACTCTGTCGACTCACTCGTGCAGATCCGTTTTGGGTTTCAGTGGCCACCCCTATGTTTCCTGTGAAGTTGACTACAACCCATATTCCAACTGATGGAGCCAACCCAGTGCAGAGTGTGGATAGAACATTTCAACTTACAAGGGCAGACAAAGACTTGGTATCAAGACCAGAATTTGATGTTCAGGCCTGGTGCATGCTGCTGAACGACAAAGTTTCATATAGGATGCAATGGCCACAATATACAGACCTGCAGGTCAATGGTGTTCCTGTTCGTGTGATTAACCGACCTGGTTCACAACTGCTCGGGGCTAACGGCCGTGATGATGGCCCAATTATCACGCCATATACAAAAGACGGAATTAATAAGATTTCCTTAACAGGCTGTGATGCTCGCATTTTCTGTTTAGGGGTCCGTATTGTTAAAAGGCGTAGCTTGCAACAGATCCTAAACACAATTCCCAAGGAGTCTGATGGGGAGCGTTTTGAAGATGCTCTTGCACGTGTATGTTCTCGTGTTGGGGGTGGAAATGCAGATGATAATGCTGACAGTGACAGTGATTTGGAAGTGGTCTCAGATACTTTTACCATCAACCTTCGTTGTCCAATGAGTGGTTCAAGAATGAGGGTTGCAGGAAGATTCAAACCTTGTGCTCACATGGGTTGCTTTGATCTTGAAATTTTTGTGGAAATGAATCAACGCTCAAGGAAGTGGCAATGTCCCATATGTCTTAAAAACTATGCATTGGAGGATATCATTATTGACCCTTATTTTAATCGGATAACTTCTATGATGAGAAATTGTGGGGAAGATGTTACTGAAATTGAGGTGAAGCCTGATGGTTATTGGCGTGCCAAGGCTAAGAGTGAAAGTGAACACCGGGAGTTAGGGAATCTTGTTCAATGGCACTGTCCTGATGGATCCCTGGCTCTTTCTACCAGTGGAGAAGTCAATGGAATGGAGGCTTTAAAGCTCAAACAGGAAGATGTTTCAGACACTCCAACTGGTCTAAGAATTGGCATGAAGAAGAATCATGATGGAGTTTGGGTATTCAGCAAACCTGAGGACACAAATACCTCATCTGGCAATGGATTGAACAAAGATTTTGGAAATCATGATCATGTGGTTATACCAATGAGCAGCAGTGACACTGTAAGTGGTCGGGAAGGTGATGATCCTAGTGTAAATCAGGGTGTCGGTGGGCATATTGATTATTCTCCTACCAATGGGATTGAGATGGATTCAGTGCCTCACAATAATGTTGATTCAGCTTATGGATATACTGTACCTAACCCTTCTGCTCTGGCAGCTGATGCAGAAGTTATTGTTCTCTCTGATTCAGAAGATGACAATGATATATTGGTATCTTCTACAATTGAGTATAAAAATAACGACACTGGTGCCGCTGATACTGATATTTACTCAATGCCACAGCCTGGAATTATTGATTCATATACAGATCACAATCTTGGTGGAAATCCATGCTTAGGGCTCTTCAGTAACCCCAATGAAGATGATTTTGGGATGCCTTCTTCCATCTGGTCATTGCCTTCAGGAACTCAGGCTGGCTCAGGATTCCAGTTATTTAGTTCAGATGCAGATGTCTCGGATGCATTGGTCCACTTGCAGAATGGTGATTTAAATGGTTATACGTTAGCTTCAGATACTTCTGCTTTGGAATCCAATTCTTTGATACAGGATTCCTCTGCAGGTCGATCTGATGCTGATTTAAATGGTGGTTTGGTTGGTGGTTTGGTAGACAATCCTCTGGCATTTGCTGGAGAAGATCCCTCACTTAAGATTTTTCTTCCAACAACACCACTGGAATCATCTGTGCAGCATGAATCAAGAGAACAGGCAGATGTGTCAAATGGTGTGTGCACTGATGATTGGATCTCTCTTAGGCTTGGAGGTGGTGCTGGTGGAAGTAATGGTAATGGTTCTGTCCCCAGTGGGTTGAATTCCAGATCGCAGGCTACATCCAGAGGAGGTGCAACAGACACATTGACAGATACTGGTTCTTTGCTTCTTGGTATGAATGATGCTAGATCTGACAAAGCAAGTAGGCCAAGATCTGACAGCCCATTCTCGTTTCCCCGCCAAAAACGTTCAAAACTGAAGAAAGCTGAGCAGCGATATTGGTGCTCAGGAAATGGAAGTTGA 2652 0.4287 MDLVSSCKEKLNSFRIKELKDVLTQLGLSKQGKKQDLIDRILSILSDEQASKIWAKKNAIGKEQVAKLVDDTFRKLQVSGAIDLASKGQGSSPDVSNVKIKGEVDEIFQEETKIRCLCGSSLETDPLIKCEDTRCHVWQHINCVIIPEKPMEPIPPLPQKFYCELCRLTRADPFWVSVATPMFPVKLTTTHIPTDGANPVQSVDRTFQLTRADKDLVSRPEFDVQAWCMLLNDKVSYRMQWPQYTDLQVNGVPVRVINRPGSQLLGANGRDDGPIITPYTKDGINKISLTGCDARIFCLGVRIVKRRSLQQILNTIPKESDGERFEDALARVCSRVGGGNADDNADSDSDLEVVSDTFTINLRCPMSGSRMRVAGRFKPCAHMGCFDLEIFVEMNQRSRKWQCPICLKNYALEDIIIDPYFNRITSMMRNCGEDVTEIEVKPDGYWRAKAKSESEHRELGNLVQWHCPDGSLALSTSGEVNGMEALKLKQEDVSDTPTGLRIGMKKNHDGVWVFSKPEDTNTSSGNGLNKDFGNHDHVVIPMSSSDTVSGREGDDPSVNQGVGGHIDYSPTNGIEMDSVPHNNVDSAYGYTVPNPSALAADAEVIVLSDSEDDNDILVSSTIEYKNNDTGAADTDIYSMPQPGIIDSYTDHNLGGNPCLGLFSNPNEDDFGMPSSIWSLPSGTQAGSGFQLFSSDADVSDALVHLQNGDLNGYTLASDTSALESNSLIQDSSAGRSDADLNGGLVGGLVDNPLAFAGEDPSLKIFLPTTPLESSVQHESREQADVSNGVCTDDWISLRLGGGAGGSNGNGSVPSGLNSRSQATSRGGATDTLTDTGSLLLGMNDARSDKASRPRSDSPFSFPRQKRSKLKKAEQRYWCSGNGS* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0468 883 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 9 817 - -
Ahy18g0468 883 SUPERFAMILY FYVE/PHD zinc finger 107 170 IPR011011 -
Ahy18g0468 883 CDD PHD_Bye1p_SIZ1_like 115 166 - -
Ahy18g0468 883 Pfam MIZ/SP-RING zinc finger 360 408 IPR004181 GO:0008270
Ahy18g0468 883 ProSiteProfiles SAP motif profile. 11 45 IPR003034 -
Ahy18g0468 883 SMART sap_9 11 45 IPR003034 -
Ahy18g0468 883 MobiDBLite consensus disorder prediction 847 873 - -
Ahy18g0468 883 MobiDBLite consensus disorder prediction 807 840 - -
Ahy18g0468 883 MobiDBLite consensus disorder prediction 801 883 - -
Ahy18g0468 883 SMART PHD_3 115 167 IPR001965 -
Ahy18g0468 883 ProSitePatterns Zinc finger PHD-type signature. 116 166 IPR019786 -
Ahy18g0468 883 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 332 449 IPR013083 -
Ahy18g0468 883 PANTHER E3 SUMO-PROTEIN LIGASE SIZ1 9 817 - -
Ahy18g0468 883 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 104 172 IPR013083 -
Ahy18g0468 883 Gene3D SAP domain 1 64 IPR036361 -
Ahy18g0468 883 ProSiteProfiles Zinc finger SP-RING-type profile. 347 430 IPR004181 GO:0008270
Ahy18g0468 883 SUPERFAMILY SAP domain 1 64 IPR036361 -
Ahy18g0468 883 Pfam SAP domain 11 42 IPR003034 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0468 Ahy-Chr18 4152842 4161386 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0468 - - gmx:100793735 1271.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0468 18 4152842 4161386 Ahy18g0468 18 4152842 4161386 ECH
Ahy18g0468 18 4152842 4161386 Ahy8g1275 8 28403012 28411405 hybridization
Ahy18g0468 18 4152842 4161386 Ahy13g0370 13 3692454 3699460 PCT
Ahy13g0370 13 3692454 3699460 Ahy18g0468 18 4152842 4161386 PCT