Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0445 ATGGGTTGCTTGCGTTGCATAGGAAAACCACGAAAAAGATTAGTCAGCAATGTATATAGCAATAATAGCCCCAAACACAGCAACAATAATAAAAATAATGCCTTTGAGGAGAGGAATAAGGGCAGAGTTGGTTTGAATGTGAAAGCGAATGTTAAAAGAGAAGGCAATTCCAATGATGATGAAAATCAACTTTCTTTGGACGTGAAGAAGTTGAATTTGAGAGATAACAATGGAAACCCCAGCAACGTCAACAAAGCGATGACCTTTACTTTTGATGAGCTTGCAGCTGCAACAGGGAATTTCAGGCCTGATTGTTTTCTTGGTGAAGGAGGGTTTGGCAAGGTTTACAAGGGCCACTTGGAGAGCATAAACCAGGTTGTAGCTATAAAGCAACTTGACCCTCATGGCCTTCAAGGAATTAGGGAATTTGTTATAGAAGTTTTGACTTTGAGTTTGGTAGATCATCCTAATCTTGTCAAGTCGATTGGGTTTTGCGCCGAGGGAGATCAGAGGCTATTGGTTTATGAGTACATGCCATTGGGATCTTTGGAGCACCATTTACATGATCTTCCACCGGGAAAAAGACCGATAAGTTGGAATACAAGGATGAAAATCGCGGCCGGTGCAGCGAAGGGGTTGGAGTATTTGCATGATAAAATGAAGCCTCCTGTCATTTACCGTGATCTGAAATGCTCTAACATTTTGCTAGATGAGAAATATCATGCCAAATTGTCTGATTTCGGCTTAGCGAAAGTAGGCCCGAGTGGTGATAAGTCTCATGTTTCGACGAGGGTTATGGGCACATATGGTTATTGTGCTCCAGATTATGCAATGACGGGTCAGTTGACATTCAAGTCTGATATTTACAGCTTTGGTGTTGTTCTTTTGGAGCTCATCACAGGAAGGAAAGTCATTGACCATAGAAGACCTGAAAAGGAAGAAAATCTAGTTGCATGGGCAAGGCCTTTATTCAAAGACCGGAAAAGATTCTCAGAGATGGTTGATCCATTGCTTGAAGGTAAATATCCAGTGAGAGGCCTGTACCAAGCTCTTGCCATTGCCGCGATGTGTCTACAAGAGCAGCCTAATATGCGGCCTAACACGGCCGATGTGGTTACAGCTCTAGACTTCCTTGCTTCGCAGAAATACGATCCTTACACTCATCCAGTCTCAAAAAGTCCATCTCCAAATCGAAAAATGGATGACCAATGGTCTGTCCCAAGCACCGGTTCTGAGACAGAAAGGAGTGATGACCCCGAATGTTCTGTTAGAAATGGTTCTGAGATATGA 1290 0.4287 MGCLRCIGKPRKRLVSNVYSNNSPKHSNNNKNNAFEERNKGRVGLNVKANVKREGNSNDDENQLSLDVKKLNLRDNNGNPSNVNKAMTFTFDELAAATGNFRPDCFLGEGGFGKVYKGHLESINQVVAIKQLDPHGLQGIREFVIEVLTLSLVDHPNLVKSIGFCAEGDQRLLVYEYMPLGSLEHHLHDLPPGKRPISWNTRMKIAAGAAKGLEYLHDKMKPPVIYRDLKCSNILLDEKYHAKLSDFGLAKVGPSGDKSHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKVIDHRRPEKEENLVAWARPLFKDRKRFSEMVDPLLEGKYPVRGLYQALAIAAMCLQEQPNMRPNTADVVTALDFLASQKYDPYTHPVSKSPSPNRKMDDQWSVPSTGSETERSDDPECSVRNGSEI* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0445 429 MobiDBLite consensus disorder prediction 386 429 - -
Ahy18g0445 429 Pfam Protein kinase domain 107 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g0445 429 Gene3D Phosphorylase Kinase; domain 1 70 177 - -
Ahy18g0445 429 ProSitePatterns Protein kinases ATP-binding region signature. 107 130 IPR017441 GO:0005524
Ahy18g0445 429 SUPERFAMILY Protein kinase-like (PK-like) 88 404 IPR011009 -
Ahy18g0445 429 MobiDBLite consensus disorder prediction 386 412 - -
Ahy18g0445 429 ProSiteProfiles Protein kinase domain profile. 101 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g0445 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Ahy18g0445 429 SMART serkin_6 101 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g0445 429 PANTHER OS07G0668900 PROTEIN 1 394 - -
Ahy18g0445 429 Gene3D Transferase(Phosphotransferase) domain 1 178 391 - -
Ahy18g0445 429 MobiDBLite consensus disorder prediction 413 429 - -
Ahy18g0445 429 MobiDBLite consensus disorder prediction 17 40 - -
Ahy18g0445 429 CDD STKc_IRAK 107 376 - -
Ahy18g0445 429 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 1 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0445 Ahy-Chr18 3839188 3842708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0445 1 415 Glycoside Hydrolase AT3G07070 53.606 5.92e-148 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Ahy18g0445 Pkinase 9.80E-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0445 - - gmx:100794680 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0445 18 3839188 3842708 Ahy18g0445 18 3839188 3842708 ECH
Ahy18g0445 18 3839188 3842708 Ahy8g1246 8 27930874 27934063 hybridization
Ahy18g0445 18 3839188 3842708 Ahy13g0395 13 4096008 4099642 PCT
Ahy13g0395 13 4096008 4099642 Ahy18g0445 18 3839188 3842708 PCT