Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0437 ATGTACACACGCGCCACCTCATCATCAACTTTTCTCTCGCCGGATTATCCCCCAGTGCACCCGTTCCCGGACGAACTGGCCCTCACGGAGTTGGAATCGCTTCTGAACTGCAACAACTCGGAGATAGTAAGCTTCAACAAGAGTAGTAGCAGCGGTAGTTACAATAGTGAGCATGGGTCGGTGATGCAGAGGAGCGTTAGCAGCAACTCTCTCCATAAGAATCCCTTCTCTGCTCTCTTGGCTGAGTTGTTCGACGACGACGCTCCTCTTAGGAGAGTTTGCAGCACCGGTGATCTCCACGGGACTACTCATGGCGGCATCATGCATAACAATAATGAATCAGCTGATAGTCCATTGTCAAGTGAAAGCAGCATGATCATTGAAGGAATGAGTAGAGCATGTAGGTATAGCCCTGAGGAGAAGAAACTCAGGATTGAGAGGTATAGAACCAAGAGAAACCAAAGAAACTTCAACAAGAAAATTAAGTATGTTTGCAGGAAGACTTTAGCAGACAGCAGGCCGCGCATTAGAGGACGATTCGCGAGGAACGACGAAATTGACAAGAATCCTTCATCAGTTCATCAATGGAGTCATCACATTGGTGCTGGAGCAGAGGAAGACCAAGAAGATCAAAACTGGGTCAGTATCTTTGATTCACTAGTTGCTGCAAATACTGATCATCAAGAGTCCCAGGACAGTTCTTCTTTCGGTTTATTGTATTAG 723 0.4661 MYTRATSSSTFLSPDYPPVHPFPDELALTELESLLNCNNSEIVSFNKSSSSGSYNSEHGSVMQRSVSSNSLHKNPFSALLAELFDDDAPLRRVCSTGDLHGTTHGGIMHNNNESADSPLSSESSMIIEGMSRACRYSPEEKKLRIERYRTKRNQRNFNKKIKYVCRKTLADSRPRIRGRFARNDEIDKNPSSVHQWSHHIGAGAEEDQEDQNWVSIFDSLVAANTDHQESQDSSSFGLLY* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0437 240 ProSiteProfiles CCT domain profile. 141 183 IPR010402 GO:0005515
Ahy18g0437 240 PANTHER CCT MOTIF PROTEIN 24 240 - -
Ahy18g0437 240 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 24 240 IPR045281 GO:0009909
Ahy18g0437 240 Pfam CCT motif 143 183 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0437 Ahy-Chr18 3756180 3757681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0437 137 188 C2C2-CO-like Transcription Factor Family AT5G15850 46.154 2.52e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy18g0437 CCT 2.60E-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0437 - - gmx:102661609 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0437 18 3756180 3757681 Ahy18g0437 18 3756180 3757681 ECH
Ahy18g0437 18 3756180 3757681 Ahy8g1239 8 27786979 27788512 hybridization
Ahy18g0437 18 3756180 3757681 Ahy13g0404 13 4192913 4195386 PCT
Ahy13g0404 13 4192913 4195386 Ahy18g0437 18 3756180 3757681 PCT