Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy18g0419 | ATGGAAGGGAAGGATAGGGAAGTACTTTGTTTATTTATAGGCTGCTGTATTCTTTTCCTTGTAGTCAATTTCTCCGACATTCTCTTGTGTGTCTTCTTGAAAGCATACCGTTTTCTCATTAGGTGTCCTTCCTCCTCGGAAGTTAACCCTTCAAGCTCCCCTAATGATCTGCAGCATCATCAAGTTGTCATTGAGTCCTTCCCTGATATCTCTTCTCTACAAAGCGACGGCTTAGACAGCTCCGTGATAAGTTCTCTTCCGGTGTCGGAGTTCGAAAATGTGGGAGACCACAAGTCTATTAACGCAGATTGTGTCATTTGTCTCGGGGAATTTGAAAAAGGGGAGAAGCTTAAGCTGCTTCCTCAATGTGCTCATGCTTTCCATGTTTCTTGCATAGATGCATGGTTTCAGTCTCATTCAAATTGCCCACTTTGCAGGTCCCAAGTCCATCATGTTGAAGATGCTATCGCCGGGTATTCAGTGTCTTTGTATCCATTGCTGGAAACTCTGAGGAGGGAAGACTTTTCCCGAGACAGCGATGAACTAATCCGATCCGTTCGGTCCGAGGTCATACAAAGCTGGGCAAGTAGACCACACACACTGTAA | 606 | 0.4505 | MEGKDREVLCLFIGCCILFLVVNFSDILLCVFLKAYRFLIRCPSSSEVNPSSSPNDLQHHQVVIESFPDISSLQSDGLDSSVISSLPVSEFENVGDHKSINADCVICLGEFEKGEKLKLLPQCAHAFHVSCIDAWFQSHSNCPLCRSQVHHVEDAIAGYSVSLYPLLETLRREDFSRDSDELIRSVRSEVIQSWASRPHTL* | 202 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy18g0419 | 201 | ProSiteProfiles | Zinc finger RING-type profile. | 104 | 146 | IPR001841 | - | |
Ahy18g0419 | 201 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 17 | 159 | IPR044675 | - | |
Ahy18g0419 | 201 | SUPERFAMILY | RING/U-box | 103 | 152 | - | - | |
Ahy18g0419 | 201 | Pfam | Ring finger domain | 103 | 146 | IPR001841 | - | |
Ahy18g0419 | 201 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 17 | 159 | - | - | |
Ahy18g0419 | 201 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 66 | 152 | IPR013083 | - | |
Ahy18g0419 | 201 | SMART | ring_2 | 104 | 145 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy18g0419 | Ahy-Chr18 | 3563255 | 3563860 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy18g0419 | 51 | 163 | C3H Transcription Factor Family | AT5G17600 | 44.348 | 1.52e-23 | 94.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy18g0419 | - | - | adu:107461568 | 382.489 |