Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0419 ATGGAAGGGAAGGATAGGGAAGTACTTTGTTTATTTATAGGCTGCTGTATTCTTTTCCTTGTAGTCAATTTCTCCGACATTCTCTTGTGTGTCTTCTTGAAAGCATACCGTTTTCTCATTAGGTGTCCTTCCTCCTCGGAAGTTAACCCTTCAAGCTCCCCTAATGATCTGCAGCATCATCAAGTTGTCATTGAGTCCTTCCCTGATATCTCTTCTCTACAAAGCGACGGCTTAGACAGCTCCGTGATAAGTTCTCTTCCGGTGTCGGAGTTCGAAAATGTGGGAGACCACAAGTCTATTAACGCAGATTGTGTCATTTGTCTCGGGGAATTTGAAAAAGGGGAGAAGCTTAAGCTGCTTCCTCAATGTGCTCATGCTTTCCATGTTTCTTGCATAGATGCATGGTTTCAGTCTCATTCAAATTGCCCACTTTGCAGGTCCCAAGTCCATCATGTTGAAGATGCTATCGCCGGGTATTCAGTGTCTTTGTATCCATTGCTGGAAACTCTGAGGAGGGAAGACTTTTCCCGAGACAGCGATGAACTAATCCGATCCGTTCGGTCCGAGGTCATACAAAGCTGGGCAAGTAGACCACACACACTGTAA 606 0.4505 MEGKDREVLCLFIGCCILFLVVNFSDILLCVFLKAYRFLIRCPSSSEVNPSSSPNDLQHHQVVIESFPDISSLQSDGLDSSVISSLPVSEFENVGDHKSINADCVICLGEFEKGEKLKLLPQCAHAFHVSCIDAWFQSHSNCPLCRSQVHHVEDAIAGYSVSLYPLLETLRREDFSRDSDELIRSVRSEVIQSWASRPHTL* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0419 201 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Ahy18g0419 201 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 17 159 IPR044675 -
Ahy18g0419 201 SUPERFAMILY RING/U-box 103 152 - -
Ahy18g0419 201 Pfam Ring finger domain 103 146 IPR001841 -
Ahy18g0419 201 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 17 159 - -
Ahy18g0419 201 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 152 IPR013083 -
Ahy18g0419 201 SMART ring_2 104 145 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0419 Ahy-Chr18 3563255 3563860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0419 51 163 C3H Transcription Factor Family AT5G17600 44.348 1.52e-23 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0419 - - adu:107461568 382.489