Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0403 ATGATTGCATTGGAATTAACTTCAAAAGATCTTACAGTGCGATGTGCATTATTTGGGGATTATGTTAATCAAGTGAATCATTTCCTTGCCTCTGGCTATGTGGAGCAGCCTGTTGTGGTGATTCAGCTTGCAAAAGTCAAGTTCTTTAGGGGTCAAGTAGGTCTTCAAAATGTGATGTATGCCACTCAAATGTTATTTAATCCTGATATTCCTGAAGTTGTTGAATTCAGGCAGAGTATGATTGAGCAAGGTGTCAATGGTACCCATCCGCTGTTTATTGCAAATGAGGGTAAAGTTCTCTCATTGGAAGATGATTTCATGCGTTTAACTAGAAAATGCACTATTGAAGAGCTTCAAGATGACAATCAGGAGGGTTCTTTTATCATTTTTAGTGCAATTCAAGGTATTGTTGAGGATGGAGGTTGGTGGTATTCTGCTTATGTGTGTGGAAAGGGTATCTATCCTCAAAATGGTGCATATTACTGTGATTTTTGTTTGAAGCACATAACTAATGTCACTCCAAGATTTAAAATTAAAATAACAGTTGAAGATCATACTGGGGAGGGTATTTTCCTTCTCTTTGATCGTGAGGCATCTTATTTACTTAAGAAATCATGTGCTGACTTGTTTACTGAGGTTCAAAGAGATGCAAGTCTTATATGTGGGGATACTTATCCTCCCATATTCCAAGTGCTCATTGGAAAGAAGTTGCTGCTCAAGGTTGATATCAAAGGTGTCCCACATGATACATTTTATGGGACTTTTCGAGTTAGGAGAATTTGTGATGATTCCACCATTATTGCGATGTTTGAACTACCCGATTATGACGCTAATGACGAGTCTACTCCAAAAAAGGAGCATGATTTACACAAATCTGTTCCTTGTGGAAAAGGAGATGTTGGTATTAAGAAGGAGTTTTCAGATAGTTTTATCAAAAGTGAGAAAGATGCTGATGATGGTGAACATGGAAAAGAAGAGAAAACACCCAGCAATGATACTGTTAGTGATGATCTTTCTGCTAAACTCGATATATTGCTTAGCTCAGCAGAAAAAGAAACTCAGGAGGTGTTGTCCCATGTTGTTGACGCATCTTTGCAATATGGAGAGAAGCTTATTCATGAGAATCATGTTGTCACCTCCAAGGGTAAGAGGAATTTGAATCCTCAATTTGAAGAGGCTGCTGTTGATGTAGATGGGCGTGGGTTCAAGGTTGCCAAGGTTAATGGAGTTTGA 1233 0.3844 MIALELTSKDLTVRCALFGDYVNQVNHFLASGYVEQPVVVIQLAKVKFFRGQVGLQNVMYATQMLFNPDIPEVVEFRQSMIEQGVNGTHPLFIANEGKVLSLEDDFMRLTRKCTIEELQDDNQEGSFIIFSAIQGIVEDGGWWYSAYVCGKGIYPQNGAYYCDFCLKHITNVTPRFKIKITVEDHTGEGIFLLFDREASYLLKKSCADLFTEVQRDASLICGDTYPPIFQVLIGKKLLLKVDIKGVPHDTFYGTFRVRRICDDSTIIAMFELPDYDANDESTPKKEHDLHKSVPCGKGDVGIKKEFSDSFIKSEKDADDGEHGKEEKTPSNDTVSDDLSAKLDILLSSAEKETQEVLSHVVDASLQYGEKLIHENHVVTSKGKRNLNPQFEEAAVDVDGRGFKVAKVNGV* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0403 410 MobiDBLite consensus disorder prediction 313 335 - -
Ahy18g0403 410 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 9 210 - -
Ahy18g0403 410 Gene3D - 104 268 IPR012340 -
Ahy18g0403 410 Pfam Replication factor-A C terminal domain 133 214 IPR013955 -
Ahy18g0403 410 Gene3D - 2 89 IPR012340 -
Ahy18g0403 410 PANTHER REPLICATION FACTOR A 1, RFA1 9 210 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy18g0403 410 SUPERFAMILY Nucleic acid-binding proteins 112 263 IPR012340 -
Ahy18g0403 410 MobiDBLite consensus disorder prediction 313 332 - -
Ahy18g0403 410 CDD RPA1_DBD_C 115 258 IPR013955 -
Ahy18g0403 410 SUPERFAMILY Nucleic acid-binding proteins 11 80 IPR012340 -
Ahy18g0403 410 CDD RPA1_DBD_B_like 10 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0403 Ahy-Chr18 3439338 3442005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0403 12 209 Core DNA Replication Machinery Family AT5G08020 24.880 7.04e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0403 - - ahf:112772142 814.298