Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0396 ATGGTAAAGCAATTGGTTTCAACAGAGAATTCCAGCCTTGAATTTAATCAGGATAAGAATAATCAAGGTTGCATGTGGGGTTTCTTTCATATTCTGGATTATCATCATTGGCATGTGAGAAAGGTGTTTGCTAACAAAAGGAAAAGACATGCCAGATGTAAGAGGAACACCATTTTGCAAAACCAAGGTGAAGAATATGTCCCAGAAGCAGAAACACTCCTAGTTGTGAAAGGTGGCGAAAAAGGCAAAAGATACCACAAACATGAGAGAAAAGAACAAGACACAGAAAACAGGCTTAAAGAAGGAAACTACAAAGGTGAATATGCACTTCATGTGGAGAAAGATGGCAAGAAAACAAAAGCTTCCCTTAACCATGAGAGTATACAAAAAAGGGCAAACAAATCTGATACAGACACTGCCAATGTGTTTAAGAATCATAGAGATGTTTTGGGGGTAGTTAAAGTGGAGAAGGATTTACTGCTTAAATTTCTAAGAGAATTAGATGCTGAAGGGAAAAACCTTCATCAAGCTTCTGACACCAAAGCAAGATTGACAAAATCAGGGTCATTTCCTTTAAGCTCATCTTCACAAATGAGAAGCATTACTCCTACTAGTACCTTGCAACACAAGAAAACCGAAGTGTGGGCCACTCCCAAAGAAGAAAGGTTGCTTGATAGTACTCAAACAACAAAACCAGTGCCTTTAGTGAGTGATCATGGCGTGCTTAGTGCCGGAGAACAAAAAACAGGCAATTCTCTGCTGCCATCTCATGGATTGAATCATAAAGGTTGGAACCAAGTTGTCATTCATCGTTTCAGAGTTATAAAGCATAAGATAAAACATACTCTTTTGGAGTTCAGAAAAAATGGTCACCACAGAGATTCATCTCAATATAGCAGCATCACTAATGATGAGAAAGAGGTGCAAAGCTTAGATGAAGGTGTGGTTCGAGAGTACATAAGGAGCAAAAGCTTAAAGGAGACTAAATCTTCTGATTATGCTTCCAACAGACAGGAAGCACAACGAGTTGTAAGAAGAACATCGTCTCTGAACGAATCGATGGATAAATATACTCAGTTGTTTGAGAAAAGCTTCAACTCAGATGTCAAGTGGCACAGTTCAAAGTCCAAAAGCTTAAGATTGACAAATGAGGATAAGAATACAAGTGACCATGCTTCTAGATTTTCCAGAAGCAATTTTTCACTGCCTAATATTGAGGCTTTAGGCTTCATTGTACACGAGGCACTTCTTGATATGAATGATAAAACAGATACTGAGGAGCCTGATAATAATGCTGACAGAAAACTGGTGGGACTTCCTTCAAAGAAAGATAAATCAATTGATCATGTTGAAGAGACTGAAATCACAGAAACAGCTAAAGCTGGCAGTGGAGATATGAATCCAAGTCCCTTATCTAATGATCAGGTTGAAGACAAAATTGATGCAGCAGTTACCAGTGAGAAAGTGGAAGATAAATATGAACATGAGTCAGCTAGGGGAGATGGAATTTTTCCTCAAGAAAAAGAAGAAATAGGTATGGCTATCCATGAAACTAAAAGTGAAGCAGATGCAACCCACCATACAGAAGGTAAAGAATTGGATATTCAAGGATCTAGCATGGATGGATTGAAGACTGATGAGTTACCAATTAAAGAAAGCAATGATTCCAATTTCAGATACGTGAAGGCCATTCTCCAATTTTCAGGTTTAATGGAAAATGAACATAGTCTAACGAGGCATACTATAGACCAGCGACTAAAGCCTTCTTTGATCATGGAAATGGAATCCTCTGTAGAGGAGAATACCAAAGCCTATGATCAACAGCTTCTTTTCAACCTAGTTGATGAGGTACTTATTGATATATATGAGAGGTCATCGAATCACTTCCCAAGGCCCTTCGCCTTCAACTACCTCCTCCATCCTGTGCCGAAAGGAGACTATCTTCTTAATGAAGTATGGTCCAGTGTTAAATCATACCTGAGCTTGAGGCCAGAGCTAGATCAGACATTAGACGATGTTGTGAGACGTGACTTGGCAAGAAGAAGTAGCTGGATGAACCTCCAGCAAGAAGAGGAGCAAGTTGCAATTGAACTAGAGGACATGATTATGGATGATTTATTAGATGAACTCGTCTTCTCATGA 2142 0.3903 MVKQLVSTENSSLEFNQDKNNQGCMWGFFHILDYHHWHVRKVFANKRKRHARCKRNTILQNQGEEYVPEAETLLVVKGGEKGKRYHKHERKEQDTENRLKEGNYKGEYALHVEKDGKKTKASLNHESIQKRANKSDTDTANVFKNHRDVLGVVKVEKDLLLKFLRELDAEGKNLHQASDTKARLTKSGSFPLSSSSQMRSITPTSTLQHKKTEVWATPKEERLLDSTQTTKPVPLVSDHGVLSAGEQKTGNSLLPSHGLNHKGWNQVVIHRFRVIKHKIKHTLLEFRKNGHHRDSSQYSSITNDEKEVQSLDEGVVREYIRSKSLKETKSSDYASNRQEAQRVVRRTSSLNESMDKYTQLFEKSFNSDVKWHSSKSKSLRLTNEDKNTSDHASRFSRSNFSLPNIEALGFIVHEALLDMNDKTDTEEPDNNADRKLVGLPSKKDKSIDHVEETEITETAKAGSGDMNPSPLSNDQVEDKIDAAVTSEKVEDKYEHESARGDGIFPQEKEEIGMAIHETKSEADATHHTEGKELDIQGSSMDGLKTDELPIKESNDSNFRYVKAILQFSGLMENEHSLTRHTIDQRLKPSLIMEMESSVEENTKAYDQQLLFNLVDEVLIDIYERSSNHFPRPFAFNYLLHPVPKGDYLLNEVWSSVKSYLSLRPELDQTLDDVVRRDLARRSSWMNLQQEEEQVAIELEDMIMDDLLDELVFS* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0396 713 MobiDBLite consensus disorder prediction 290 309 - -
Ahy18g0396 713 MobiDBLite consensus disorder prediction 376 392 - -
Ahy18g0396 713 MobiDBLite consensus disorder prediction 180 212 - -
Ahy18g0396 713 PANTHER PROTEIN TRM32 1 713 - -
Ahy18g0396 713 PANTHER PROTEIN TRM32 1 713 IPR044257 -
Ahy18g0396 713 MobiDBLite consensus disorder prediction 178 213 - -
Ahy18g0396 713 MobiDBLite consensus disorder prediction 376 396 - -
Ahy18g0396 713 Pfam Domain of unknown function (DUF4378) 558 709 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0396 Ahy-Chr18 3369140 3373234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0396 148 703 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 29.153 8.13e-39 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0396 - - ahf:112772681 1414.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0396 18 3369140 3373234 Ahy18g0396 18 3369140 3373234 ECH
Ahy18g0396 18 3369140 3373234 Ahy8g1201 8 27363107 27367260 hybridization