Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy18g0390 | ATGGCCAGCAATGTGGTCAACATTATTGGATCTCTCATCATCTCTCTAATGTGGATGGTGGAGGCTAGAATCCCAGGAGTGTACTCCGGTGGTGCTTGGCAAACTGCTCACGCCACATTCTACGGAGGATCTGACGCTTCGGGAACCATGGGGGGAGCATGTGGGTACGGAAACCTGTATAGCCAAGGATATGGAGTGAACACGGCGGCGCTGAGCACGGCGCTCTTCAATAGCGGTCTAAGCTGCGGTGCCTGCTTTGAGATCAAGTGTGCCAACGACAGGCAGTGGTGCCACTCCGGCAGCCCTTCCATATTCATAACCGCAACAAACTTCTGCCCCCCAAACTACGCACTCCCAAGTGACAATGGCGGTTGGTGCAACCCTCCCAGACCTCACTTCGATCTTGCCATGCCAATGTTCCTCAAGATCGCTGAGTACCGTGCCGGCATCGTCCCCGTTGCCTATCGCCGGGTGCCATGTAGAAAGCACGGTGGGATCAGGTTCACAATTAACGGATTCCGTTACTTCAATTTGGTATTGATCAGCAACGTCGCGGGTGCAGGGGATATAGTGAGGACGTACGTGAAGGGTTCAAGAACCGGGTGGATGCCAATGAGCAGGAACTGGGGCCAGAACTGGCAGTCAAACGCGGTCTTAGTGGGTCAAGCCTTGTCCTTCCGTGTCACCGCCAGTGACCGTCGCACCTCCACCTCTTGGAACATTGCTCCCTCCAACTGGCAGTTCGGTCAAACTTTTACCGGAAAGAATTTCCGGGTTTAA | 780 | 0.5436 | MASNVVNIIGSLIISLMWMVEARIPGVYSGGAWQTAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNSGLSCGACFEIKCANDRQWCHSGSPSIFITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKHGGIRFTINGFRYFNLVLISNVAGAGDIVRTYVKGSRTGWMPMSRNWGQNWQSNAVLVGQALSFRVTASDRRTSTSWNIAPSNWQFGQTFTGKNFRV* | 260 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy18g0390 | 259 | Pfam | Lytic transglycolase | 68 | 155 | IPR009009 | - | |
| Ahy18g0390 | 259 | PRINTS | Expansin signature | 90 | 101 | IPR002963 | GO:0009664 | |
| Ahy18g0390 | 259 | PRINTS | Expansin signature | 104 | 114 | IPR002963 | GO:0009664 | |
| Ahy18g0390 | 259 | PRINTS | Expansin signature | 140 | 153 | IPR002963 | GO:0009664 | |
| Ahy18g0390 | 259 | PRINTS | Expansin signature | 176 | 197 | IPR002963 | GO:0009664 | |
| Ahy18g0390 | 259 | PRINTS | Expansin signature | 240 | 256 | IPR002963 | GO:0009664 | |
| Ahy18g0390 | 259 | PRINTS | Expansin signature | 164 | 176 | IPR002963 | GO:0009664 | |
| Ahy18g0390 | 259 | PRINTS | Expansin signature | 123 | 140 | IPR002963 | GO:0009664 | |
| Ahy18g0390 | 259 | PRINTS | Expansin signature | 63 | 77 | IPR002963 | GO:0009664 | |
| Ahy18g0390 | 259 | PRINTS | Expansin signature | 211 | 232 | IPR002963 | GO:0009664 |
Showing 1 to 10 of 26 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy18g0390 | - | - | gmx:100809139 | 515.768 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy18g0390 | 18 | 3333336 | 3335566 | Ahy18g0390 | 18 | 3333336 | 3335566 | ECH | |
| Ahy18g0390 | 18 | 3333336 | 3335566 | Ahy17g1078 | 17 | 14495784 | 14498051 | ECH | |
| Ahy18g0390 | 18 | 3333336 | 3335566 | Ahy13g0462 | 13 | 4766751 | 4769163 | ECH | |
| Ahy14g1631 | 14 | 87712199 | 87715383 | Ahy18g0390 | 18 | 3333336 | 3335566 | ECH | |
| Ahy12g1782 | 12 | 96078704 | 96081830 | Ahy18g0390 | 18 | 3333336 | 3335566 | ECH | |
| Ahy18g0390 | 18 | 3333336 | 3335566 | Ahy8g1196 | 8 | 27334679 | 27336939 | hybridization | |
| Ahy18g0390 | 18 | 3333336 | 3335566 | Ahy13g0462 | 13 | 4766751 | 4769163 | PCT | |
| Ahy13g0462 | 13 | 4766751 | 4769163 | Ahy18g0390 | 18 | 3333336 | 3335566 | PCT |
Showing 1 to 8 of 8 entries