Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0385 ATGGTGTTAGAGAGGAGGCTAGACTATGATTTTAATGGCCACCAAGTGCAAGTCAAGCGGCGAGCTCGTTCAGCTAGGAGGAGGGCTAAATTTCAAAGAAGGGTGGAAGATAATCAAATGTGTGCTTTTGACTTATTGGCAACTGTAGCTGGCAAGTTGTTCTTGCAAGAGAAAGAGCATCCACTCACATCTGGGGATAAATCTTCGGAAAAGATTCAGCAAGGGTTTGTTAAAGAAGAGTGCCGGGATGCAAGTGAACCATTCGAAGCTGAGCTTTCCAACGAGGGTTGTCACAGAAGATGTGAGCATGGATTTGTTAAAGATGATTCCAAGAATGCAGATAAGCCATTCAAAGCCGAGCTTTATGTTGAAGGAAGTAGTGACATAAAATGCTTGTCAAATACAGAAGTACAAAGTGAAAATTGCCATTTTAAGGAACTCTCACATCCTAAAATTGATGGCAATTCACATGTTGCTTCAATGGTGGCCAATTCCAGTTGCTTGGAGAGGCTTGGTGCTGAGAGATTGGCGGATGAAAAAAACCATAATGAAGTGGAAAATCTTATTAGCAAAGTTGAATTAGGTCTTAGTAGCAAAGTTGAATTAGGTTCTTCTGGAAGTCCAGATACTATTGGATGCAACTTAGGTGGTGATGTAAGTAAAGTAAAGGATGAGCTGCATAAGTTTGCTAAGGCACCAGTTGTTACTTCAACTGAGATGCGCTGCTTGGACGATCCCGTGGGCGAAAAGTCTCCTGTACAGTTAAGTTCAGGTGGCAATGCCAAGTTGTCTGGGTGTGTTGACAACATGCCTTATAGCACATTGTCTGAAGGTTATGACAATGTGCCTGTAGTTAGTAGAGATGATGACGAAAACTTTTCAGGGTGTGATAACCCTTCTTTCGAAACAAAGTCCTTTAGGCCAATTAGTCATATAGGTGATCAGAGTATAAGGAAAACATTGGCAGCTAAATACTGTAAAGTGGCCCAACAGTCAAAACATGATACACTTTCTAATAGTGACACTGGAATGTCTTCCCTAGGAACACATCAGTACTCTTCATTAGGATCTAAAGATTCTCATGTGAACCTTAGGATCAAATCGTTTAGAGTGCCCGAGCTTTTCATTGAGATACCGGAAACTGCAACCATTGAGTCCTTGAAGAGGTCAGTGATGGAGGCAGTGACTGCTGTACTTGGAGGTGGATTGCGTGTCGGTGTGATTCTCCATGGGAAAAAGGTTAGGGATGATAGTAAAACTCTACTTCAAGCAGGAATTTCTCATGATAAACAGCTGGATGCTTTGGGCTTTACCCTGGAGCCTATTTCTTCTCAAAGCCCAACACCTCTATGTGCTGCAGATTCTCGCCATGTTCCTACTGTAGACAAGCCTCAGCCGTTACCAAGGTACCCTTCTAGTGCAGCAATTCATCAAAGAAATCAGAGCTGTTCTGATGTGTTACCCGAGCATCGGGTAACCAGTTTAGGTAACCTTGTTGAAAGTGATCAAGATTCAGCACTTTCTCCTGTCAACACAGCAGTTTACAAAAGACTAGCAGATTCAAGAGCTTTGGTTACTGTTCCAGAGATGGGCGTGCAAGCACTATCTCTGCTACCTGTGCCGCAGAAGTCAAAAAGACCCGAGACTGTGCAGCGCCGAATTCGTAGACCTTTTTCTGTTGCTGAGGTGGAAGCTCTGGTTCAAGCAGTTGAGAAACTGGGAACTGGAAGGTGGCGTGATGTTAAACTTAGAGCTTTTGATAATGCAAAACACCGGACATATGTCGATTTGAAGGACAAATGGAAAACCCTGGTACACACGGCAAGAATATCCCCTCAGCAAAGAAGGGGAGAGCCTGTTCCACAAGAACTTTTGGATAGGGTCCTAACTGCTCATGCTTTTTGGTCCCAGCACCAAACTAAACAACAGCTCAACAAGCAGCACCAACAACAACAACATCAGCAGCAACCACAAACTTGCCTTCTCCTTCAATAA 1995 0.4346 MVLERRLDYDFNGHQVQVKRRARSARRRAKFQRRVEDNQMCAFDLLATVAGKLFLQEKEHPLTSGDKSSEKIQQGFVKEECRDASEPFEAELSNEGCHRRCEHGFVKDDSKNADKPFKAELYVEGSSDIKCLSNTEVQSENCHFKELSHPKIDGNSHVASMVANSSCLERLGAERLADEKNHNEVENLISKVELGLSSKVELGSSGSPDTIGCNLGGDVSKVKDELHKFAKAPVVTSTEMRCLDDPVGEKSPVQLSSGGNAKLSGCVDNMPYSTLSEGYDNVPVVSRDDDENFSGCDNPSFETKSFRPISHIGDQSIRKTLAAKYCKVAQQSKHDTLSNSDTGMSSLGTHQYSSLGSKDSHVNLRIKSFRVPELFIEIPETATIESLKRSVMEAVTAVLGGGLRVGVILHGKKVRDDSKTLLQAGISHDKQLDALGFTLEPISSQSPTPLCAADSRHVPTVDKPQPLPRYPSSAAIHQRNQSCSDVLPEHRVTSLGNLVESDQDSALSPVNTAVYKRLADSRALVTVPEMGVQALSLLPVPQKSKRPETVQRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAFWSQHQTKQQLNKQHQQQQHQQQPQTCLLLQ* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0385 664 SMART sant 554 607 IPR001005 -
Ahy18g0385 664 PANTHER TELOMERE REPEAT-BINDING PROTEIN 2-RELATED 1 662 - -
Ahy18g0385 664 SUPERFAMILY Homeodomain-like 556 637 IPR009057 -
Ahy18g0385 664 CDD SANT_TRF 556 606 - -
Ahy18g0385 664 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 551 609 IPR017930 -
Ahy18g0385 664 MobiDBLite consensus disorder prediction 640 664 - -
Ahy18g0385 664 ProSiteProfiles Myb-like domain profile. 550 605 IPR001005 -
Ahy18g0385 664 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 662 IPR031105 -
Ahy18g0385 664 SUPERFAMILY Ubiquitin-like 356 447 IPR029071 -
Ahy18g0385 664 Gene3D - 543 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0385 Ahy-Chr18 3296454 3303048 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0385 - - gmx:100780881 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0385 18 3296454 3303048 Ahy8g1191 8 27301994 27307229 hybridization
Ahy18g0385 18 3296454 3303048 Ahy13g0467 13 4808168 4812953 PCT
Ahy13g0467 13 4808168 4812953 Ahy18g0385 18 3296454 3303048 PCT