Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0383 ATGGCTGATCCAAGCCATGGTGGAAATCCGGCCACCGATTTCACAACTAATAGGGATGAAAATCCAGCTCCCTTTGATGAGAGTGATTTCTCTGCTGCAGCCCTAAAGTACATAGATGAAATGCTTATGGAAGAAGACATTGATGAAGAGTACAACATGTTCCAACATTCCTCGGCTCTCCTAACAGCTGAGAAATCACTTTATGATGCCATTGGCCAGAGGTATCCTTCTTCTGCCTCTACTTTGTCGTCTTCAACTTCTTCTTCTATCCAGCATCATAATTACTACCCCAATGTGGAGAGCCCTGGGGATAGTTATAGCAGTATTAGTTCTGGCAGCACTTGTGGCACCACCAATACTAGCAGCTCTGCTGACTACTTCTGGAGCGGTTTTGATCTTTCTATGATTCCATTGATGCCAAACACTTTACCTTTTCCTGATACCTTTAATTTTCAGTCCAATCCATCCTCCACCACCCCCCAATCTAACCACAGAAGCGACTTCACTGCCACAAACAATAGTAGTGGATTAGGACAGGTGGTGATTAAGACTGAAGAAGTCGATTATGATTTCGAGGAAGAGGAAGAGGAAGAGGAAGAGGTCCAATTTCTTGCTGAGTCCATGGGAAGCAGTAGCAAGCAATCAGCATTGTACATGGATGACACTGAGCTATCCGAATTTTTTGATAAGGTACTTCTTGGAGCTGGATTGGGAAGAGGATCATCACAAGCTGATGAAGGCGTTCCCAAAGACTCTCGCGGTAAGAAGAGCCGTGCAAGGAAAAGAAATGACAAAAATGACGATGAAGTTATTGATCTGAGGTCATTGTTGATGCAATGTGCACAAGCAGTTTCTTCTGATAACCGTCCAATGGCAAAAGAGTTATTGATGCAGATTAAGCTGCATTCTTCTCCAACAGGTGATGCAACTCAGAGATTGTCCCATTACTTTGTAAATGCTCTCGAAGCACGCATGTCAGGGACAGGTACACACATTCATAGTGCCTTATCCACAAAAAGGCCCTCTGCTTCTGATATGGTCAAGGCCTACCAAATGTATGCATCAGCTTGTCCATTTGACAAGTTTGGAATCAGGTTCTCAATCAACTCAATTGACAATTCGGCCATGGAAGGTGTCCAAACTCTTCACATTGTCGAATTTGGCATCCGCTATGGCTTCAAGTGGCCTGGACTTATATATCGCCTATCCAGACTCCCCAGTGGGCCTCCAAAGCTTCGCATAACCGGGATAGAGTATCCACTGCCTGGTTTGAAGCTTGAGCAAACAGGGCAATGCTTAGCAAGGTATTGCGAGCGATTCAACGTCCCTTTCGAGTTCAATGCTGTTGTTGCAAAGAAATGGGAGAGAATCAAAGTTGAGGATCTCAAGATAAGGGAGAATGAGTTTGTAGCTGTGAATTGCATGTTTAGATTTGAGAATCTGCATGATGAGACAGTTGTGTTGGAGAATCCTAGAGATTCTGTTTTGGAGTTAATAAGGAAGGCTAATCCAAACGTATTTGTACATGGCATTATAAATGGTAACTATGATGCTGCATTCTTCGTGACAAGGTTTAAGGAGGCAATGTTTCATTACTCAGCAATGTTTGACATGCTTGATAACACTGTTGCCCGTGATGATCCTATAAGGTTGATGTATGAGGAAGCTATATTTGGGAAGGAAGTGATGAATGTTGTGGCTTGTGAAGGGAATGAGAGGATTGAGAGACCACACAATTACAAGAAATGGCAGGTAAGGAACACAAGAGCAGGGTTCAGGCAGCTTTCATTGGATGAACAAATGATTGAGAAGTTTAAGGATATGTTGAGAAATGAAGGTTATCATAAAGATTTCATGCTTCATGCTGATGGCAAATGGCTTCTACAAGGTTGGAAGGGCAGAATCCTATATGCTTCTTCTTGTTGGGTACCAGCATAG 1938 0.4309 MADPSHGGNPATDFTTNRDENPAPFDESDFSAAALKYIDEMLMEEDIDEEYNMFQHSSALLTAEKSLYDAIGQRYPSSASTLSSSTSSSIQHHNYYPNVESPGDSYSSISSGSTCGTTNTSSSADYFWSGFDLSMIPLMPNTLPFPDTFNFQSNPSSTTPQSNHRSDFTATNNSSGLGQVVIKTEEVDYDFEEEEEEEEEVQFLAESMGSSSKQSALYMDDTELSEFFDKVLLGAGLGRGSSQADEGVPKDSRGKKSRARKRNDKNDDEVIDLRSLLMQCAQAVSSDNRPMAKELLMQIKLHSSPTGDATQRLSHYFVNALEARMSGTGTHIHSALSTKRPSASDMVKAYQMYASACPFDKFGIRFSINSIDNSAMEGVQTLHIVEFGIRYGFKWPGLIYRLSRLPSGPPKLRITGIEYPLPGLKLEQTGQCLARYCERFNVPFEFNAVVAKKWERIKVEDLKIRENEFVAVNCMFRFENLHDETVVLENPRDSVLELIRKANPNVFVHGIINGNYDAAFFVTRFKEAMFHYSAMFDMLDNTVARDDPIRLMYEEAIFGKEVMNVVACEGNERIERPHNYKKWQVRNTRAGFRQLSLDEQMIEKFKDMLRNEGYHKDFMLHADGKWLLQGWKGRILYASSCWVPA* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0383 645 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 183 644 IPR005202 -
Ahy18g0383 645 ProSiteProfiles GRAS family profile. 264 643 IPR005202 -
Ahy18g0383 645 Pfam GRAS domain family 273 642 IPR005202 -
Ahy18g0383 645 MobiDBLite consensus disorder prediction 1 27 - -
Ahy18g0383 645 MobiDBLite consensus disorder prediction 238 266 - -
Ahy18g0383 645 PANTHER SCARECROW-LIKE PROTEIN 14 183 644 - -
Ahy18g0383 645 PANTHER SCARECROW-LIKE PROTEIN 14 21 88 - -
Ahy18g0383 645 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 21 88 IPR005202 -
Ahy18g0383 645 MobiDBLite consensus disorder prediction 147 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0383 Ahy-Chr18 3280368 3283747 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0383 27 644 GRAS Transcription Factor Family AT2G29060 44.113 6.84e-176 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy18g0383 GRAS 4.20E-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0383 - - aip:107614541 1228.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0383 18 3280368 3283747 Ahy18g0383 18 3280368 3283747 ECH
Ahy14g1624 14 87178726 87182138 Ahy18g0383 18 3280368 3283747 ECH
Ahy18g0383 18 3280368 3283747 Ahy8g1190 8 27285012 27288256 hybridization
Ahy18g0383 18 3280368 3283747 Ahy13g0468 13 4815347 4818714 PCT
Ahy13g0469 13 4820283 4823474 Ahy18g0383 18 3280368 3283747 PCT