Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0382 ATGGATCCAAACCGCGTTAGGAACACCGATTACATAAACGCCTACGGATTCGGCGACTATGGTGGTGCTTTGCTTTCAGATTTCAACGATTGGGATCTACACAGACAATACAATCACCCTTTCGATTTAACTCCAAGTAATGCTTTTGATCGGTTTGACGCCGACACATTTGGCTTGCATGCACATGCGGTTTCGAATTCCGGAAGCTCGGAGCCGTTTGTTCCACCCTCTTCCGCGAGCCGTGTGGAAAAATCCATGCCGGGTTCAGCTTTTGGGGCTGTGGCTTCTATGCCGGATCCTTCCGTGGAAGACACGGACTTTTCTGAAACGGTGAGGTACATAAGCCAGATTTTGTTGGAAGAGAATTTTGAGGATAAGCCTTGCATGTGCTATAATCCTCTTAGCCTGCAAGATACTGAGAAATCGTTCTATGATGCCCTCAATCAAGAATTTCCCCTTTCCCCTAATGAGCACCCTCTTGATATTCATCAGAATCTGGAGAGTCCTGATGGTGTTAGTGCTGGAAGCTTCCCCACTGGTTCTTCTGGAGGTTGCAGCAATAGCAACAGCAGTAGCACTAGCACTAGCAGTAGTGAGAACCATTTAAGTTCTCATGACTTCAAGACCCTTTCTCCAGATACTCCTGTTTCCGGTGATAGTTCTTTGCAGTTTGATTCTCATTCGCATTTGATTTCGCATGTGCCTTCTCAGCTTCACCTTCCTCAACATGCTTTGACTAGTATTGGTGATGGGGTGTTTGATTTGGATCCTTCTGCAACGAAGCTCTTGGCTCAGAATATCTTTAGTAATGCTGACTCTATCTTGCAGTTCAAAAGAGGGTTGGAGGAAGCCAGTAAATTTCTTCCCCCTGGGCCAAGGCTTTCCACTGGCCTGGAGAGCAGTAGCATGCATGCAGAAGAGTCAAAGAGAAGGGTGGAGAAGGCTGCAGTGCCAGTGATGGTGGAGAATGATGCTAAGGAGAGATCAAACAGAGTTGTTGCTGGGCCATATCACATAGTTCCAGCAACAACAAAAGCTGCAAAAAATACAGCAGCGAGGAGTCTGGATGGGGTGAAGAGTAGGAAGCATCATGCTCGCCAGGGCGATGATGGTGAAGAAGAAAGATGCAACAAGCAATCTGCGGTTAGTGTTGAGGAAGAAAATGAAATATCTGAAATGTTTGACAAGGTGCTGCTTAGTGTTGAAAATGTCCCACTGTCTGCTGAACAGCAGGGTGGATTGGTTGTGGATACACAACTAATTGAACAACCACATTCATCCGAGGGAGGGAGGAGTCGATCCAAGAAAAAAGGCAGGAAGAAAGAAACTGTGGATTTGAGAACTCTTTTGGTTCTGTGTGCCCAAGCTGTGTCTGCCAATGACCAAAGGACTGCTAATGAACTACTAAAGCAGATCAGACAGCATTCCTTGCCCTTCGGCGATGCATATCAGAGGCTGGCTCGTTACTTTGCCGATGGCCTGGAGGCACGCATGGCTGGCACTGGCCCTGGAATTCATATATTCTATGCCTCTCTCAGCTACAAGAAGTTCAGTGCTGCTGATTTTCTCAAGGCCTACCAAGTTTTTATATCTGCTTGCCCTTTCAAGAAATTTGCACATTTCTTTTCAAATAAGATGATTTTGAACATAGCTGAAAAGGCAGAAACTCTTCATATTGTTGATTTCGGTATCCTGTATGGTTTCCAGTGGCCAATACTTATCAAATTTCTAGCCAAGAGAGATGGAGGGCCTCCCAAGCTGCGGATCACAGGAATTGAGTATCCCCAAGCTGGATTTCGTCCCACAGAAAGAATTGAGGAGAGTGGACGTCGTCTAGCTAAATATTGCAAGCTTTTCAATGTTCCCTTTGAGTACAAAGCCATAGCATCAAGACACTGGGAAACCATTCAGATTGAAGACCTTAACATCAAGGACAATGAGGTAGTTGCTGTGAACTGTCTGGTAAGGTTCAAGAATTTACTCGAGGAGACGGTTGAAGTGAACAGTCCTAGAAATGCAGTTTTGAATTTAATCAGGAGGATAAACCCAGCTATTTTTGCTCACACAGTCGTAAATGGTTCTTATAATGCCCCTTTCTTCCTCACACGCTTTCGGGAAGCACTGTTCCATTATTCTGCAATTTACGATATGTTTGATACTCTCATACCCCGAAACAATGCATGGAGGTCGATGCTTGAGAGAGAGTTTTTGGGTCGGGAGATCATGAATGTTGTAGCATGTGAAGGTCTAGAAAGGGTTGAGAGGCCTGAAACATACAAGCAGTGGCAGGCTAGGAATTCAAGAGCTGGTTTTAGGCAGCTACCACTGGATAAGGCGTTAATGTCCAAATTTAGGAGCAAGTTAAAGGAATGGTACCAACACCACAAAGATTTTGTTTTTGATGAAGACAACAACTGGATGCTTCAAGGTTGGAAGGGCCGGATTTTGTATGCCTCCTCCTGTTGGGTGCCAGCATGA 2478 0.4528 MDPNRVRNTDYINAYGFGDYGGALLSDFNDWDLHRQYNHPFDLTPSNAFDRFDADTFGLHAHAVSNSGSSEPFVPPSSASRVEKSMPGSAFGAVASMPDPSVEDTDFSETVRYISQILLEENFEDKPCMCYNPLSLQDTEKSFYDALNQEFPLSPNEHPLDIHQNLESPDGVSAGSFPTGSSGGCSNSNSSSTSTSSSENHLSSHDFKTLSPDTPVSGDSSLQFDSHSHLISHVPSQLHLPQHALTSIGDGVFDLDPSATKLLAQNIFSNADSILQFKRGLEEASKFLPPGPRLSTGLESSSMHAEESKRRVEKAAVPVMVENDAKERSNRVVAGPYHIVPATTKAAKNTAARSLDGVKSRKHHARQGDDGEEERCNKQSAVSVEEENEISEMFDKVLLSVENVPLSAEQQGGLVVDTQLIEQPHSSEGGRSRSKKKGRKKETVDLRTLLVLCAQAVSANDQRTANELLKQIRQHSLPFGDAYQRLARYFADGLEARMAGTGPGIHIFYASLSYKKFSAADFLKAYQVFISACPFKKFAHFFSNKMILNIAEKAETLHIVDFGILYGFQWPILIKFLAKRDGGPPKLRITGIEYPQAGFRPTERIEESGRRLAKYCKLFNVPFEYKAIASRHWETIQIEDLNIKDNEVVAVNCLVRFKNLLEETVEVNSPRNAVLNLIRRINPAIFAHTVVNGSYNAPFFLTRFREALFHYSAIYDMFDTLIPRNNAWRSMLEREFLGREIMNVVACEGLERVERPETYKQWQARNSRAGFRQLPLDKALMSKFRSKLKEWYQHHKDFVFDEDNNWMLQGWKGRILYASSCWVPA* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0382 825 MobiDBLite consensus disorder prediction 169 221 - -
Ahy18g0382 825 Pfam GRAS domain family 446 822 IPR005202 -
Ahy18g0382 825 MobiDBLite consensus disorder prediction 355 382 - -
Ahy18g0382 825 MobiDBLite consensus disorder prediction 288 311 - -
Ahy18g0382 825 MobiDBLite consensus disorder prediction 421 441 - -
Ahy18g0382 825 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 73 824 IPR005202 -
Ahy18g0382 825 MobiDBLite consensus disorder prediction 154 221 - -
Ahy18g0382 825 MobiDBLite consensus disorder prediction 346 384 - -
Ahy18g0382 825 PANTHER SCARECROW-LIKE PROTEIN 34 73 824 - -
Ahy18g0382 825 ProSiteProfiles GRAS family profile. 437 823 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0382 Ahy-Chr18 3262521 3266017 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0382 110 825 GRAS Transcription Factor Family AT1G07530 47.730 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy18g0382 GRAS 1.50E-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0382 - - aip:107612146 1605.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0382 18 3262521 3266017 Ahy18g0382 18 3262521 3266017 ECH
Ahy18g0382 18 3262521 3266017 Ahy13g0468 13 4815347 4818714 ECH
Ahy18g0382 18 3262521 3266017 Ahy8g1189 8 27266781 27270145 hybridization
Ahy18g0382 18 3262521 3266017 Ahy13g0469 13 4820283 4823474 PCT
Ahy13g0470 13 4848344 4850938 Ahy18g0382 18 3262521 3266017 PCT