Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0381 ATGCTTTCTACCAATCCTTATCTAGAAAATTTCCCTGGTCATCTGCAACCAATAATGAATGGTTTTCATTCATCATCTTCATCTTCTTCCGGAACCATCTCAAGTGGAGATTCCACTGAGTCTAGTAAATATTCCAATAACATCCTCAGATACATAAGTGACATCCTCATGGACGAGGAAGATGACTTGGAGAACAAACCCTGTATGTTGCAACAGTGTTTGAGGCTCCAAGCTGCTGAAAAATCATTCTCTGAGGTGCTTGGAAATTCATCAAATTCTCCACCATCTCAAGGCTGCGATGAAAGCAACCAAGATGGTGATTACTGTCGCAGCACAAGCTTCGAAAGCTATAGCAGCTTTAACACTGATAATAGCTCTTATGAGTTTGATTGGGTCAATCTTGTTGGCGAGTATGAATCTTCTTTGCTACAAGCCTCTCTTCTTGGTGGATCTTATGGAACTCACTACCAGAACATGGTTCCATTGATCAACAATGAAGAAGGATCTAGTCCTGGAACAAGGGAAAAGAGAAGCTATCAGGTTGATGATGACGCTTCATATGAACAAGGCCGAAGAGGAAACAAGATCTCAGCTACTGTTTTCTCCGACGAGTCAGAACCACCGGAGATTCTTTATGAAGTGCTGCGTATCCCGTATGGAAGAAGTAAAAAATATTGTTGTGTTGAGCCGTTATCAAAAAATGACATGCTGAAGATGCAGAATGTTGGATCCAATTCCAAGACAGGACGTTCAAAGAACAGAAACAGCAACACAGATGCAACTGTGGATTTATGGACTCTGCTAACTCAATGTGCACAAGCAGTGGCAGACTATGATAAGAGGAATGCATACGATACACTCAAGCAGATTAGGCAGCATTCTTCACCGTCCGGCGATGGACTCCAGCGTATGGCGCATTACTTCGCCATTGGCCTCGAGACACGGTTGAATGCCGGAACACCGTCATATCCTCCCCTTGATATGGCTTCTGCTGCAGATATGTTGAAAGCTTACAAACTCTACGTTACAGCTTCGCCTTTGCAGTGGATGACAAATAAATTGGCAACCCAAACAATCAAGAACCTGGTTCAGAATGAAAGCCGCGTTCACATTATTGACTTTGGAATTAGCTATGGTTTCCAGTGGCCCTGCCTTATCAAGTATATGTCAGAGAGAAACGGGGCTATAAAGCTTCGTATAACCGGAATTGATCTTCCTCAGCCGGGTTTCCGGCCGACGGAAAGGGTCGAGGAGACCGGAAGACGGTTGGAGACTTTGTGTAAGAGGTACAAGGTGCCTTTCGAATACAACTGCATTGCACAGAAATGGGAAACAATTAGGGTTGAGGATCTTAAGATAGATAGGGATGAAGTGACCGTTGTTAACTGCTTCTACAGGCTGAAAAACCTGCCTGATGAAACTGTGTCAGTGAACAGTCCAAGAGATGCAGTGCTGAAGCTGATGAGGAGGATTAATCCAAAGATCTTCCTGCATGGGGTAGTCAATGGCTCTTATAGTGCACCGTTTTTCCCGACTCGGTTCAGGGAGGCTCTGTTCCACTTCTCATCACAGTTTAATATGTTTGAAGCTAATTGCCCCCGCGAAGATGCAGAAAGGATGATGCTTGAGAAAGGGATGATTGGAAGGGATGCTATCAATGTGATAGCTTGTGAGGGAGCAGAGAGAGTTGAAAGGCCAGAGAGCTACAAGCGATGGCAGATTAGGAACAAGAGAGCAGGATTCAAGCAAATTCGGGTGGATCAGGAATTGGTGAATGAAATCAAGGGAATGGTGAAGAATGAGTATCATAGAGATTTTGTGGTTGACCAGGATGGCAACTGGGTTTTGCATGGCTGGAAAGGTCGTATTTTTCATGCTCTCTCTGTTTGGGTTCCTGCATAA 1902 0.4427 MLSTNPYLENFPGHLQPIMNGFHSSSSSSSGTISSGDSTESSKYSNNILRYISDILMDEEDDLENKPCMLQQCLRLQAAEKSFSEVLGNSSNSPPSQGCDESNQDGDYCRSTSFESYSSFNTDNSSYEFDWVNLVGEYESSLLQASLLGGSYGTHYQNMVPLINNEEGSSPGTREKRSYQVDDDASYEQGRRGNKISATVFSDESEPPEILYEVLRIPYGRSKKYCCVEPLSKNDMLKMQNVGSNSKTGRSKNRNSNTDATVDLWTLLTQCAQAVADYDKRNAYDTLKQIRQHSSPSGDGLQRMAHYFAIGLETRLNAGTPSYPPLDMASAADMLKAYKLYVTASPLQWMTNKLATQTIKNLVQNESRVHIIDFGISYGFQWPCLIKYMSERNGAIKLRITGIDLPQPGFRPTERVEETGRRLETLCKRYKVPFEYNCIAQKWETIRVEDLKIDRDEVTVVNCFYRLKNLPDETVSVNSPRDAVLKLMRRINPKIFLHGVVNGSYSAPFFPTRFREALFHFSSQFNMFEANCPREDAERMMLEKGMIGRDAINVIACEGAERVERPESYKRWQIRNKRAGFKQIRVDQELVNEIKGMVKNEYHRDFVVDQDGNWVLHGWKGRIFHALSVWVPA* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0381 633 MobiDBLite consensus disorder prediction 85 105 - -
Ahy18g0381 633 ProSiteProfiles GRAS family profile. 255 631 IPR005202 -
Ahy18g0381 633 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 12 632 - -
Ahy18g0381 633 MobiDBLite consensus disorder prediction 162 193 - -
Ahy18g0381 633 MobiDBLite consensus disorder prediction 170 190 - -
Ahy18g0381 633 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 12 632 IPR005202 -
Ahy18g0381 633 Pfam GRAS domain family 266 630 IPR005202 -
Ahy18g0381 633 MobiDBLite consensus disorder prediction 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0381 Ahy-Chr18 3256143 3258481 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0381 38 632 GRAS Transcription Factor Family AT2G29060 43.408 2.10e-159 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy18g0381 GRAS 7.50E-101 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0381 - - aip:107612146 1280.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0381 18 3256143 3258481 Ahy18g0381 18 3256143 3258481 ECH
Ahy18g0381 18 3256143 3258481 Ahy8g1188 8 27260507 27262843 hybridization