Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0371 ATGAGTTTTGTTTTCAGAGGGAGTAGGGGAGATATTGAAAGTGGTTTTCCAGATTATGTTCCTGAAAGATCCTTAATGCGTATTCATCCGGCTCGACCAATTAGTAGCAATTCTCTGGCTTTTCTTACCACAGTTATTGTGTTATTCATGCTGCTGAACTCTCCTCAGATGGCACATTATTTTATGTTATGGCTTGTGCTTGCTGTTTTTGCGATGGCTACAAGCTTGAGGATGTACACAGCTTGTCAGCATCTTCAAGCTCAGGCCAGGGCTCATGCAGCAGCAGCAACTGGATTGCTTAGCCAGACCGAATTATGGCTTCATGTGCCACCATCCATAGCAATTGCAACTAGAGGACAATTGCAGGGGCTTAGGCTTCAGCTTGCACTACTTGATCGTGAATTCGATGAACTAGGGGTAGATTATGATGCTTTGAGAGCTCTTGACTCTGATACTGCTTCGACTACTACTTCCATGACTGAGGAAGAGATAAACGCCTTACCTGTTCACAACTATAAAGTTGCAGTTCCAACAAAGGATTGCTCAGCAGGGTTGGGATCCTCTTCGGGTGCTGCTGAGAATAAGCAAGCCTGCGAAGGAGCCGAGGGAAATAACCAAGGCCCGGAAGATGAGCTAACATGTACCATATGCTTGGACCAAGTTAACCGTGGCGAACTAGTCCGTAGCCTGCCATGCTTGCATCAGTTTCATGCCAACTGCATTGATCCATGGCTCCGGCAGCGAGGAACATGTCCGGTGTGCAAATTTAAGATGGGTTCGGAATGGCGAGGAAACAGGGAGACCGAGACTGATTCCGACGGTTCAGATATTGCTTAG 837 0.4683 MSFVFRGSRGDIESGFPDYVPERSLMRIHPARPISSNSLAFLTTVIVLFMLLNSPQMAHYFMLWLVLAVFAMATSLRMYTACQHLQAQARAHAAAATGLLSQTELWLHVPPSIAIATRGQLQGLRLQLALLDREFDELGVDYDALRALDSDTASTTTSMTEEEINALPVHNYKVAVPTKDCSAGLGSSSGAAENKQACEGAEGNNQGPEDELTCTICLDQVNRGELVRSLPCLHQFHANCIDPWLRQRGTCPVCKFKMGSEWRGNRETETDSDGSDIA* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0371 278 ProSiteProfiles Zinc finger RING-type profile. 214 255 IPR001841 -
Ahy18g0371 278 SUPERFAMILY RING/U-box 209 259 - -
Ahy18g0371 278 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 190 261 IPR013083 -
Ahy18g0371 278 SMART ring_2 214 254 IPR001841 -
Ahy18g0371 278 CDD RING-H2_PA-TM-RING 213 255 - -
Ahy18g0371 278 PANTHER TARGET OF ERK KINASE MPK-1 1 276 - -
Ahy18g0371 278 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 1 276 - -
Ahy18g0371 278 Pfam Ring finger domain 213 255 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0371 Ahy-Chr18 3203519 3207040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0371 1 278 C3H Transcription Factor Family AT3G55530 66.071 1.82e-120 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0371 K16283 - gmx:100805406 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0371 18 3203519 3207040 Ahy18g0371 18 3203519 3207040 ECH