Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0366 ATGATAGATTTTTTGGATAAGCTGATTAACATGCATGGATGTGGATTGACTACTTCTCTTCCTCTTCCTCCTCCTTTGACTGCACCCAACAACTTCCTTTCTCAAATTAGCACACAACTATGCTTGAGATCCCTTCTTTCCATCCAGACCCAAAACCCGTCACTTTCTTTCATACCCACTTGCAAATATAGATATACAAGTGCTTTCAGATACGGGAATCATGGGATTCGGAACAATCGTGGCAACAGACCAGTGGCTATGAGAGCAAGCCGCGGAGAATCTCCGTACGAGATTCTGGGAGTGTCCCCATCCGCAACTTCCGACGAAATCAAAAGGGCCTATAGGAAACTTGCCCTCAAGTATCACCCTGATGTTAACAAAGAGGATAAGGCGCAGGAGAAGTTTATGAGGATAAAGCATGCATACAATACCCTGATAAATTCTAATTCCCGCAGAAAATATGATTTTGGAAATCGTGGTTCTGATTATTCATATTCCTCTTCTCAAAGAAGCCAAAGTAGGAGCACACAAGAAGAAGAATTTTATGGATTTGAGGACTTTTTTAAAGATCTTCAAGAAGAATTCAAGAACTGGGAAGCTAATGCTGCTTCAGAGGGACAGCCAAAGAGCCTATGGGAGGAAATAGCGGAAATAGGAGAAGAATTTGTGGAGTTTCTTGAGAAAGAACTCAGTATTGTTGATACAGAAGCTGATCAAAATAACAATGAAACAACTCAGGGTGGAAATAAATCTAACATGTCTGGGACAGGCACACCGGATAATGAAGCTGGCAAAGGAAAAACAAGCATTGAGGATAACCTTGATGATGTAGAAGCCACTCTGGCCAAGTTAAAGAAGGAACTAGGCTTATAG 873 0.4147 MIDFLDKLINMHGCGLTTSLPLPPPLTAPNNFLSQISTQLCLRSLLSIQTQNPSLSFIPTCKYRYTSAFRYGNHGIRNNRGNRPVAMRASRGESPYEILGVSPSATSDEIKRAYRKLALKYHPDVNKEDKAQEKFMRIKHAYNTLINSNSRRKYDFGNRGSDYSYSSSQRSQSRSTQEEEFYGFEDFFKDLQEEFKNWEANAASEGQPKSLWEEIAEIGEEFVEFLEKELSIVDTEADQNNNETTQGGNKSNMSGTGTPDNEAGKGKTSIEDNLDDVEATLAKLKKELGL* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0366 290 CDD DnaJ 95 147 IPR001623 -
Ahy18g0366 290 Pfam DnaJ domain 95 155 IPR001623 -
Ahy18g0366 290 Coils Coil 267 287 - -
Ahy18g0366 290 SUPERFAMILY Chaperone J-domain 56 154 IPR036869 -
Ahy18g0366 290 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 66 288 - -
Ahy18g0366 290 Coils Coil 223 243 - -
Ahy18g0366 290 MobiDBLite consensus disorder prediction 157 179 - -
Ahy18g0366 290 Gene3D DnaJ domain 92 204 IPR036869 -
Ahy18g0366 290 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 66 288 - -
Ahy18g0366 290 MobiDBLite consensus disorder prediction 234 274 - -
Ahy18g0366 290 MobiDBLite consensus disorder prediction 235 263 - -
Ahy18g0366 290 ProSitePatterns Nt-dnaJ domain signature. 135 154 IPR018253 -
Ahy18g0366 290 SMART dnaj_3 93 150 IPR001623 -
Ahy18g0366 290 PRINTS DnaJ domain signature 96 114 IPR001623 -
Ahy18g0366 290 PRINTS DnaJ domain signature 114 129 IPR001623 -
Ahy18g0366 290 PRINTS DnaJ domain signature 130 150 IPR001623 -
Ahy18g0366 290 MobiDBLite consensus disorder prediction 157 178 - -
Ahy18g0366 290 ProSiteProfiles dnaJ domain profile. 94 158 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0366 Ahy-Chr18 3146672 3151312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0366 96 155 C2H2 Transcription Factor Family AT1G74250 39.394 2.12e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0366 - - adu:107461539 511.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0366 18 3146672 3151312 Ahy18g0366 18 3146672 3151312 ECH
Ahy18g0366 18 3146672 3151312 Ahy8g1173 8 27062304 27065202 hybridization