Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0342 ATGAATAGTTCTGGTTTGGGAGGTAGTTTTTTAGGTGGTCCTGCTGGGGGTATCTTGGACCTCGAATTGCCATTTCATAGACACCAACAACAATCCCAGATGGGTCATCCGTCGGTGACGGGACAGCATCACTTGAATATGAGGACTGATCTGGAAAATGATCACCCAATTGGCCTCATGGAACTCAAAGGGTCGAATGCGGGGGTGAATTTTGGTAAAGGAAAGGGAATTGCTTCTTCTAATCCTGCCAATAGTAATGATTTGAGCGATGATGACGATGCAGAAGATGGGAATTGCGAGAATTTTGATGGTGGGAAGAGCAAAAAGGGGTCTCCTTGGCAGCGAATGAAGTGGACAGACAATGTGGTTCAGCTTCTTATAGCTGTGGTGAGCTGTGTGGGGGACGATGGAACCATTAATGGCACGGATGGTCATAAAAGGAAATCCGGTGTCTTGCAAAAGAAGGGCAAGTGGAAAACCGTCTCCAAGATAATGATAAGCAAGGGTTGTCATGTGTCGCCGCAGCAGTGCGAGGACAAGTTTAACGACTTAAATAAGAGGTACAAGAGGTTAAATGATATACTTGGAAGGGGAACTTGTTGCCAAGTGGTTGAGAATCCTACACTGATGGATTCGATGCCAAACCTCTCAGCTAAGGCAAAGGATGATGTTAGAAAGATACTGAGCTCAAAACACCTGTTTTATAAGGAGATGTGTGCTTACCATAACGGGCAGAGGATACCAAACTTCCATGATCTTGACTTACAAGGTTATTCTTTGGATCATGGCAGGGACTCCAGAGATAACAATGGCTCTGAGGATGAAGCTGAGGATAACAATGAAAGTGATGATGATGATTTGGATAATGCACATGGGGATGGAGAGAGGGCGGATGAGTTCTGTGATAGAAGAAAATCGAGCGAGGAGGATTTCCATTTTTGGCCACAATCTATTGAGATGGACAAATTTGAAGTTGAAATGGCAAGGGTTTTTCAAGACCCAACAAAGTCAGTGAGGGAACGAAGAGAGTGGATCAAGATAAAGATGTTGCAGCTTCAAGAGCAAAGAGTGAGCTACCAAGTGCAAGCACTTGAACTCGAAAAACAACGATTTAAGTGGTTGAGATACTGCAGCAAGAAGGATAGAGAGCTGGAGAGGCTGAGGTTGGAGAACGAGAGGATGAAATTGGAAAATGAGCGCAGGGTCTTGAAACTGAAGCAGAAAGAGCAGGAAACAGATTTAAGTAGGCCTGAGATGTCCTTAGACCCTGCTTCTCTCGGAATTAATAGACCGCAAGGGAGGGAACATTTCAACTTTAGCTGA 1323 0.446 MNSSGLGGSFLGGPAGGILDLELPFHRHQQQSQMGHPSVTGQHHLNMRTDLENDHPIGLMELKGSNAGVNFGKGKGIASSNPANSNDLSDDDDAEDGNCENFDGGKSKKGSPWQRMKWTDNVVQLLIAVVSCVGDDGTINGTDGHKRKSGVLQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNDILGRGTCCQVVENPTLMDSMPNLSAKAKDDVRKILSSKHLFYKEMCAYHNGQRIPNFHDLDLQGYSLDHGRDSRDNNGSEDEAEDNNESDDDDLDNAHGDGERADEFCDRRKSSEEDFHFWPQSIEMDKFEVEMARVFQDPTKSVRERREWIKIKMLQLQEQRVSYQVQALELEKQRFKWLRYCSKKDRELERLRLENERMKLENERRVLKLKQKEQETDLSRPEMSLDPASLGINRPQGREHFNFS* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0342 440 MobiDBLite consensus disorder prediction 73 113 - -
Ahy18g0342 440 MobiDBLite consensus disorder prediction 274 288 - -
Ahy18g0342 440 Coils Coil 377 413 - -
Ahy18g0342 440 MobiDBLite consensus disorder prediction 261 303 - -
Ahy18g0342 440 Coils Coil 349 369 - -
Ahy18g0342 440 Pfam Myb/SANT-like DNA-binding domain 115 240 IPR044822 -
Ahy18g0342 440 MobiDBLite consensus disorder prediction 289 303 - -
Ahy18g0342 440 PANTHER F16F4.11 PROTEIN-RELATED 13 416 - -
Ahy18g0342 440 PANTHER TRANSCRIPTION FACTOR TRIHELIX FAMILY-RELATED 13 416 - -
Ahy18g0342 440 Gene3D - 118 190 - -
Ahy18g0342 440 MobiDBLite consensus disorder prediction 407 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0342 Ahy-Chr18 2935430 2937937 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ahy18g0342 Myb_DNA-bind_4 3.40E-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0342 - - ccaj:109806698 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0342 18 2935430 2937937 Ahy18g0342 18 2935430 2937937 ECH
Ahy18g0342 18 2935430 2937937 Ahy8g1146 8 26696600 26699176 hybridization