Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0335 ATGAATTCAAACAACTGGCTATCATTCCCACTCTCTCCAACTCATTCATCACTACCACCTCTGGGAACATTGGTGAATGACAACATCGATAACTCCTTTCAAAATCATGATTGGAATCTGATAAACAATGAGAGCAGCAGCAGTAGTCAAGTTCCGAAGGTAGCAGATTTTCTTGGTGTGAGTAACAAGTCTGAGAATGAGTCAGATCTTGCAGGCTTGGATGATGACTCGGATTACTTGTTCAACGCAAACACAACCCTTTTGCCTCTGCAAGTTCTTTCTAATAATAGCAGCTATGACTACCAACAACAAGAAGACAGTAACAACAATAACAGTAGTAGTAATCTTCATCAGTCACTCACACTCTCCATGGCTACTGCCAACAAGGACTCCACTACTTCCGACACCACTTGTGCCACTGCCATCGTTGAAGCTTCAGCTGCTGCCCCGAGAAGAGCTTTGGATACCTTTGGTCAGAGAACTTCTATTTATCGTGGTGTAACAAGACATAGGTGGACTGGAAGGTATGAAGCTCATCTATGGGATAATAGTTGTAGAAGGGAGGGTCAATCAAGAAAAGGTCGCCAAGTGTATTTGGGTGGATATGACAAAGAAGAGAAAGCAGCAAGGGCTTATGATTTAGCCGCACTTAAGTACTGGGGAACTTCCACCACTACCAACTTTCCCATGAGTAACTACGAGAAAGAGTTGGAAGACATGAAGCACATGACAAGACAGGAATTCGTAGCAGCCATTAGAAGGAAGAGCAGTGGATTCTCAAGGGGAGCATCAATGTATCGTGGAGTCACAAGGCATCATCAACATGGAAGATGGCAAGCAAGGATAGGAAGAGTAGCGGGAAACAAAGATCTGTACTTGGGAACTTTCAGTACGGAAGAAGAAGCTGCAGAAGCTTATGACATTGCAGCCATAAAGTTCAGAGGTCTAAATGCAGTTACAAACTTCGACATGAGTCGCTACGATGTGAAAGCCATTCTTGAAAGCAACACACTTCCCATTGGAGGAGGTGCTGCAAAACGCTTAAAGGAAGCTCAGGCTCTAGAATCTTCTAGAAAGACTAATAGAGATGATATCATAGCATTGGGATCCACCTTTCCATACGGATCTTCTTCATCAAACACAACCGCCACCAGATTTTTGCAGCAAGCAACAGCTTATCCTTTAATGCCGCAGCACCACTTCGATCATCATCATCATCATCAACCATTGTTAACGTTACAGAACCATGACATATCACAACATTACAACACTGATCCTGCTTCTTCTTCGTTTCATCATACTAATTCTTATCTCCAAACGCAGCTTCAGCTCCATCATCAACAGCATCAAACTACTTCTTCTTCTTCTTCGTCTTCATACAATAATAATAATGCTCAATTTTACAGCAGCTACCTTCAGGGATTCATGGACCATAACAATGGGAATGGCGGAGGAGGTTACCATCATCATCATCATAACACTAATAATATGATTGGGATTGGAATGGGTTCTAATAATAACTCCTCATCGAGCAATGCCACAGCAGTGGGATCAGCGGAGGAGCTTGCTCTTGTGAAGGTTGATTATGACATGCCTTCCGCGGGATACGGCGGCTGGTCGCCGGCGGCAGACACCATGCACGGTTCAAACGGCGGTGGTGTCTTCACAATGTGGAATGAATGA 1683 0.4379 MNSNNWLSFPLSPTHSSLPPLGTLVNDNIDNSFQNHDWNLINNESSSSSQVPKVADFLGVSNKSENESDLAGLDDDSDYLFNANTTLLPLQVLSNNSSYDYQQQEDSNNNNSSSNLHQSLTLSMATANKDSTTSDTTCATAIVEASAAAPRRALDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGTSTTTNFPMSNYEKELEDMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQALESSRKTNRDDIIALGSTFPYGSSSSNTTATRFLQQATAYPLMPQHHFDHHHHHQPLLTLQNHDISQHYNTDPASSSFHHTNSYLQTQLQLHHQQHQTTSSSSSSSYNNNNAQFYSSYLQGFMDHNNGNGGGGYHHHHHNTNNMIGIGMGSNNNSSSSNATAVGSAEELALVKVDYDMPSAGYGGWSPAADTMHGSNGGGVFTMWNE* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0335 560 Pfam AP2 domain 266 315 IPR001471 GO:0003700|GO:0006355
Ahy18g0335 560 Pfam AP2 domain 163 221 IPR001471 GO:0003700|GO:0006355
Ahy18g0335 560 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 5 559 - -
Ahy18g0335 560 CDD AP2 264 325 IPR001471 GO:0003700|GO:0006355
Ahy18g0335 560 SUPERFAMILY DNA-binding domain 162 231 IPR016177 GO:0003677
Ahy18g0335 560 SUPERFAMILY DNA-binding domain 264 325 IPR016177 GO:0003677
Ahy18g0335 560 MobiDBLite consensus disorder prediction 442 461 - -
Ahy18g0335 560 ProSiteProfiles AP2/ERF domain profile. 163 229 IPR001471 GO:0003700|GO:0006355
Ahy18g0335 560 PRINTS Ethylene responsive element binding protein signature 305 325 IPR001471 GO:0003700|GO:0006355
Ahy18g0335 560 PRINTS Ethylene responsive element binding protein signature 164 175 IPR001471 GO:0003700|GO:0006355
Ahy18g0335 560 CDD AP2 162 231 IPR001471 GO:0003700|GO:0006355
Ahy18g0335 560 Gene3D AP2/ERF domain 163 231 IPR036955 GO:0003700|GO:0006355
Ahy18g0335 560 Gene3D AP2/ERF domain 265 325 IPR036955 GO:0003700|GO:0006355
Ahy18g0335 560 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 5 559 - -
Ahy18g0335 560 ProSiteProfiles AP2/ERF domain profile. 265 323 IPR001471 GO:0003700|GO:0006355
Ahy18g0335 560 SMART rav1_2 163 235 IPR001471 GO:0003700|GO:0006355
Ahy18g0335 560 SMART rav1_2 265 329 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0335 Ahy-Chr18 2859844 2862868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0335 1 560 AP2-EREBP Transcription Factor Family AT1G51190 59.869 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Ahy18g0335 AP2 1.00E-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0335 K09285 - gmx:100788471 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0335 18 2859844 2862868 Ahy18g0335 18 2859844 2862868 ECH