Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0330 ATGACGGATACTTCAGTTTTCATGGGTACCGCAATTTTGGAGCCTCGGAATGATATGGAGTTTGAATCTCATGAGGCTGCATATGCATTTTACAAAGAATATGCTAAGTCTGCTGGGTTTGGTACTGCCAAGTTGAGCAGTCGTAGGTCTAGGGCATCCAAGGAATTCATTGATGCTAAATTTTCGTGTATAAGGTATGGTAATAAGCAGCAATCCGATGATGCCATTAATCCGCGGCCTTCTCCGAAAATTGGTTGTAAAGCAAGCATGCATGTGAAGAGAAGACAGGATGGTAAGTGGTATGTCTATAGATTTGAGAAGGATCATAATCATGAGCTTTTGCCTGCCCAAGCTCATTTTTTTCGGAGTCATAGGAGTTCTGATCCACTGAGTAATGATGTTCGGATGCGACGGAGGAAGAACTCAACTACAGTTTCTAAATTGTTTAGCGCGTATCAAAATGTTGATTGTTTAGAGAATTTCATGAAAAATCAACATGATCGTGGACGGAGTCTGATTTTAGAACCAGGGCATGCACAGTTGCTTCTTGAACTCTTCATGCAAATGCAGGAAGAGAATCCAAAGTTCTTCTATGCAGTTGATTTGAATGAAGAGCATCGACTGAGAAATGTGTTCTGGGTTGATGCTAAAGGCTTAGAAGATTATGCTTACTTTTCTGATGTTGTTTCCTTTGACACAACGTATTTTACAAGCAAGTATAAAATACCATTGGTACTTTTCATTGGAGTAAACCATCATATTCAGCCAACATTGCTTGGCTGTGCATTGATTGCCGATGAGACTGTATATACTTTTGCTTGGTTGCTGCAAACATGGTTTATAGCAATGGAGGAACGAGCACCACAAGTTATTCTTACCGACCAAAATGATGCTATTAAAGCAGCTGTTGCTGCTGTTCTTCCAGGAACACGGCACTATTATTGTTTGTGGCAGATTTTGGAAAAGATACCAAAGCAGCTTGATTGTTTAGGCACGTGGCATGATAGCTTTATGGAGAAGTTCAACAAATGTATATATAAATCATGGACAGAAGATCAATTTGAAACGAGATGGTGGAAGTTAGTCGACAGGTTTAACCTTAGAGACGTTACGTGGGTCCAATCCCTGTATGATGATCGTGCATATTGGGTGCCTACTTTCATGAGAGATATTTCTTTTGGTGGCTTTTCTACTAGTTCTCGCTCAGAGAGTTTAAATGCTTTTTTTGACAATTATGTCCAAGTTGATACTTCATTGAGAGAATTTGTAGAACAGTACAGAGTTATTCTTGGAGACAGGCATGAAGAGGAAGCAAAGGCAAATTTTGATGCATGGCATGAAACACCTGAATTGAGGTCTCCTTCCCCTTTTGAAAAACAAATGTTATTAGTTTACACACATGAAATTTACAAAAGGTTTCAGGTTGAGGTTTTGGGTGCAGCTGCTTGCCATCTCAAGAGAGAGAACACTGGAGTGACTGAAACTTATTCTGTGAAAGACTTTGAAAACAATGAAAACTATATGGTAGAATGGAACACGTCTAACTCAGATATATGTTGTTCATGTCGCTCATTTGAATATAAAGGCTATCTTTGTAGACATGCTATTGTTGTTCTACAAATGTCTGGGGTTTTCAGCATCCCATCAAAGTATATATTGCAGAGATGGACCAATGCTGCTTTGAGCAGGCATCCTATTGGTGAAAAGCTGGAAGAGGTTCAATTCAAGGTCCGGCGATTCAATGATTTATGTCGACGGGCCATAATATTGGGTGAAGAAGGTTCTTTATCACAGGAAAGCTACTATCTCGCTTTAGGTGCAATAAGCGAAGCTTTAAAGCAATGTGCAAATTTGAGCAACCCTGTTGAGAATGATACAAGAGCTGATGCCTCAGCTACCCATGTTGTTTGTAATGATGAAGAGTATCAATCTATTATTTCATCTAATAATATAACCCCTGTTCCAAAAATTAATACAAGTAATAAGGTTGCGAGGACTCTTGTAGCTTGTAGGAATCTTGGAAGCACAGAAAATGGTGAACAAAATAAAGAGAAGGTTTCCCAGCTTGAAGCAGCATGTGTGAAAGATGGTTTTCAACAAGTGGATCCAACTGATTTGACTCCTCCACATACTGCCATCCCCATGCAGTTTCACAGTATGATTCCAGCCCTGTTCCACAATCACAACGTTTCACCGGCACAGTTTCATGCTCATTTGCATGAAACTCATCATACCAAAGACAATGTATAA 2250 0.3956 MTDTSVFMGTAILEPRNDMEFESHEAAYAFYKEYAKSAGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDAINPRPSPKIGCKASMHVKRRQDGKWYVYRFEKDHNHELLPAQAHFFRSHRSSDPLSNDVRMRRRKNSTTVSKLFSAYQNVDCLENFMKNQHDRGRSLILEPGHAQLLLELFMQMQEENPKFFYAVDLNEEHRLRNVFWVDAKGLEDYAYFSDVVSFDTTYFTSKYKIPLVLFIGVNHHIQPTLLGCALIADETVYTFAWLLQTWFIAMEERAPQVILTDQNDAIKAAVAAVLPGTRHYYCLWQILEKIPKQLDCLGTWHDSFMEKFNKCIYKSWTEDQFETRWWKLVDRFNLRDVTWVQSLYDDRAYWVPTFMRDISFGGFSTSSRSESLNAFFDNYVQVDTSLREFVEQYRVILGDRHEEEAKANFDAWHETPELRSPSPFEKQMLLVYTHEIYKRFQVEVLGAAACHLKRENTGVTETYSVKDFENNENYMVEWNTSNSDICCSCRSFEYKGYLCRHAIVVLQMSGVFSIPSKYILQRWTNAALSRHPIGEKLEEVQFKVRRFNDLCRRAIILGEEGSLSQESYYLALGAISEALKQCANLSNPVENDTRADASATHVVCNDEEYQSIISSNNITPVPKINTSNKVARTLVACRNLGSTENGEQNKEKVSQLEAACVKDGFQQVDPTDLTPPHTAIPMQFHSMIPALFHNHNVSPAQFHAHLHETHHTKDNV* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0330 749 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 3 706 IPR031052 GO:0006355
Ahy18g0330 749 CDD NTF2_like 353 442 - -
Ahy18g0330 749 ProSiteProfiles Zinc finger SWIM-type profile. 507 543 IPR007527 GO:0008270
Ahy18g0330 749 PANTHER PROTEIN FAR1-RELATED SEQUENCE 4 3 706 - -
Ahy18g0330 749 SMART 26again6 518 545 IPR006564 GO:0008270
Ahy18g0330 749 Pfam FAR1 DNA-binding domain 30 115 IPR004330 -
Ahy18g0330 749 Pfam MULE transposase domain 228 321 IPR018289 -
Ahy18g0330 749 Pfam SWIM zinc finger 513 541 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0330 Ahy-Chr18 2787482 2791510 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy18g0330 MULE 5.20E-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0330 - - adu:107461496 1524.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0330 18 2787482 2791510 Ahy8g1136 8 26554124 26558145 hybridization