Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0329 ATGGAGTCAGATCTTCAGGCACCGAGTTCGAACGGGTTGACACGGTACCGATCGGCACCGAGTTCATACTTCACGGACATAATTGACCGCGAATTCTACGAGCACATTTTCAACCGTCCGTCAAGTCCAGAAACAGAGCGAGTCTTCTCCAGGTTCATGAACAGTCTCCGTGACGATGCTGCACCTGAAGACGATTCACTCCATCTCGATTCTTCTTCTGTCAAAGAAGAACACGATATCACTCCCTCGCAACCTCTTCTCTTTCAACACCACCAGCAGCAGCAGCAGCAGAACAACGTCAATAGCTTCAACTATCAAAGCACGTCGAGACCGCCGTTGCCGAATCAGAATCAGAATCTTGCTTCCTCCGGTGGTGTAGAAGGAGTGTATTCTAATAATAATAATAACAATAATCGGTTGCCGCAGACGAAGAATCAATCTAATCTTGTTAGGCACAGTAGCTCACCTGCTGGACTATTTTCCCAAATTCACATTGAAAATGGGTATGTTGTTGATATGCGAGGGATGGGAACTTTAGGAGCAGTAAATAAGAGTGTGGAAGAAGTGAAGTTCTCTTCTTCAAGGACAAGGAGGTTGAAGAATCCACAGAACTACTCCTCCTCCGCCTCCGGGAGAATGTCTTCAATAGCTGAGATTGGCAATAGGGACAGCAGAGAAGACAATCCAGATGCTGAAGCTTTTGGGGAAACCCAGGGCGAGGATTTCATCACGGAGTTGGCGCCCTGGGATGATTCTGTCGCCGTGAATGACATTGTTGCTGGTCTAAAAAGATTCAGAGATGATGATGTGAAGCCATTTTCTTCTGGTTTGAATGCAGCTGAGACTCAGAACGAAAGTAGAGGACAGCAAGCTGCTCCTTTGGCTCATCAAATGAGTTTGCCAAATACTTCAGCTGAAATGGCAGCCATTGAGAAGTTCTTGCAATTTTCAGATTCTGTTCCGTGCAAAATTCGTGCCAAGAGAGGCTGTGCCACTCACCCAAGAAGCATTGCAGAGAGGGTTAGAAGAACTAAAATAAGTGAGCGTATGAGGAAACTACAAGATCTGGTGCCTAACATGGACAAGCAAACAAACACAGCAGACATGTTGGATTTGGCTGTCGATTACATCAAAGACCTTCAAAAGCAAGTTGAGACGCTTTCAGACTGTCAAGCTAAGTGTACGTGTTCTTCCAAGCCACAGCAATAA 1209 0.4582 MESDLQAPSSNGLTRYRSAPSSYFTDIIDREFYEHIFNRPSSPETERVFSRFMNSLRDDAAPEDDSLHLDSSSVKEEHDITPSQPLLFQHHQQQQQQNNVNSFNYQSTSRPPLPNQNQNLASSGGVEGVYSNNNNNNNRLPQTKNQSNLVRHSSSPAGLFSQIHIENGYVVDMRGMGTLGAVNKSVEEVKFSSSRTRRLKNPQNYSSSASGRMSSIAEIGNRDSREDNPDAEAFGETQGEDFITELAPWDDSVAVNDIVAGLKRFRDDDVKPFSSGLNAAETQNESRGQQAAPLAHQMSLPNTSAEMAAIEKFLQFSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQVETLSDCQAKCTCSSKPQQ* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0329 402 Gene3D - 331 399 IPR036638 GO:0046983
Ahy18g0329 402 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 11 60 - -
Ahy18g0329 402 MobiDBLite consensus disorder prediction 59 77 - -
Ahy18g0329 402 MobiDBLite consensus disorder prediction 85 153 - -
Ahy18g0329 402 Pfam Helix-loop-helix DNA-binding domain 335 381 IPR011598 GO:0046983
Ahy18g0329 402 MobiDBLite consensus disorder prediction 59 153 - -
Ahy18g0329 402 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 333 392 IPR036638 GO:0046983
Ahy18g0329 402 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 330 380 IPR011598 GO:0046983
Ahy18g0329 402 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 96 399 - -
Ahy18g0329 402 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 96 399 - -
Ahy18g0329 402 MobiDBLite consensus disorder prediction 196 213 - -
Ahy18g0329 402 MobiDBLite consensus disorder prediction 193 213 - -
Ahy18g0329 402 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 11 60 - -
Ahy18g0329 402 SMART finulus 336 386 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0329 Ahy-Chr18 2775199 2778433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0329 6 398 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 38.695 3.78e-73 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy18g0329 HLH 5.20E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0329 - - gmx:100805812 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0329 18 2775199 2778433 Ahy18g0329 18 2775199 2778433 ECH
Ahy18g0329 18 2775199 2778433 Ahy13g0570 13 5952498 5956602 ECH
Ahy16g0369 16 7224047 7228598 Ahy18g0329 18 2775199 2778433 ECH
Ahy12g1618 12 87721576 87724841 Ahy18g0329 18 2775199 2778433 ECH