Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0307 ATGGAGCTCGGGATTGATGGCTCCATTAATGGTGAGACAATAGCACATGCTACCATAGGAGAAGTTAGCAGTAGCTTTGCTGATGAAGATAAAATTGCTAGCAGTTCCTTTGATCCAGCTTACAAACAAGATCAAGATGGTAATATAACACAAGATTCTTCTGGAGGGGACACAATCCCCTCAGGAATTCCTGCTGTATCGGTTGTGTCAGCTGATGAGCCATACGTGGGTCAGGAGTTTGATTCGGAAGCAACAGCGCATGCATTTTATAATGCATATGCCACGCGTGTTGGATTTGTCATACGTGTAAGTAAGCTCTCACGGTCAAGGCGTGATGGTTCTGCAATTGGACGTGCTCTTGTTTGCAACAAAGAGGGTTACAGAATGCCCGATAAGCGTGAAAAAATTGTAAGGCAAAGGGCAGAGACAAGGGTTGGTTGCAGGGCAATGATTTTGGTGAGGAAAGTTAGTTCCGGTAAATGGGTTGTCACAAAGTTTGTAAAGGAGCACACACACCCTTTGACACCTGGAAAAGGCAGAAGGGATTGCATTTATGAACAATATCCGAATGAACATGATAAAATTCGAGAACTATCTCAGCAATTGGCTATAGAGAAAAAACGGTGTGCAGCTTATAAAAGGCAACTTGAATTGTTATTTGAACACATTGAGGAGCATAATAATAGTCTTTCAAAGAAAATACAGCACATAGTAGGCAATGTGAAGGAGATTGAAGCTGAAGAACAACAGCGTCATAGATAG 762 0.4213 MELGIDGSINGETIAHATIGEVSSSFADEDKIASSSFDPAYKQDQDGNITQDSSGGDTIPSGIPAVSVVSADEPYVGQEFDSEATAHAFYNAYATRVGFVIRVSKLSRSRRDGSAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHTHPLTPGKGRRDCIYEQYPNEHDKIRELSQQLAIEKKRCAAYKRQLELLFEHIEEHNNSLSKKIQHIVGNVKEIEAEEQQRHR* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0307 253 MobiDBLite consensus disorder prediction 37 63 - -
Ahy18g0307 253 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 2 251 - -
Ahy18g0307 253 Pfam FAR1 DNA-binding domain 89 175 IPR004330 -
Ahy18g0307 253 Coils Coil 195 215 - -
Ahy18g0307 253 MobiDBLite consensus disorder prediction 38 60 - -
Ahy18g0307 253 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0307 Ahy-Chr18 2541887 2544294 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy18g0307 FAR1 7.40E-31 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0307 - - gmx:100806900 424.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0307 18 2541887 2544294 Ahy18g0307 18 2541887 2544294 ECH
Ahy18g0307 18 2541887 2544294 Ahy8g1103 8 26103304 26105762 hybridization
Ahy18g0307 18 2541887 2544294 Ahy13g0599 13 6246846 6249130 PCT
Ahy13g0599 13 6246846 6249130 Ahy18g0307 18 2541887 2544294 PCT