Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0298 ATGGACAAGGACAAACCTCTTGTTCATGGTGGAGGTCTTCCACCTCCATCAGGACGTTATTCGGGTTACTCACCCACTGGAAATGCCTTCAATGTGAAATCCGAGCCGTCTTCATCGTCGTCATATCCTCCAATGGTTCCAGGTTCTAGCCCAGACTCCAGTCACTTTGGTCATGGAATGTCCTCAGATTCTAGTGGATTTAGTCACGATATTAGCAGAATGCCCGATAATCCTCCAAGAAATAGGGGACACAGGCGTGCTCATTCAGAGATTCTAACCCTACCTGATGATATCAGCTTCGACAGTGACCTTGGTGTCGTTGGAGGTGCCGATGTGCCGTCGTTTTCTGACGACACAGAGGAGGACTTACTTTCAATGTACCTCGATATGGATAAATTCAATTCATCATCTGCTACATCAACATTTCAAATGGGTGAGCCATCTAATGCTGCTGCAGCTTCAGGTTCGGTACCCACATCAACTCCTACATCAGGAGGGCCTACCTCTTCTGCAGAGAACAGTGTCCTTGGTAACAATGAACGGCCTAGAGTTAGACACCAGCACAGCCAATCCATGGATGGGTCAACAACCATCAAACCTGAGATGCTCGTCTCTGGTTCAGAAGACATATCTGCAGCTGATTCTAAAAAAGCAATGTCAGCTGCCAAGCTTGCCGAACTAGCCTTAATTGATCCCAAGCGTGCAAAGAGGATTTGGGCAAATAGGCAGTCTGCTGCAAGGTCAAAAGAGAGGAAGATGCGCTACATTGCTGAACTTGAAAGGAAGGTGCAGACATTGCAAACTGAAGCAACATCTTTGTCTGCACAGTTAACACTATTGCAGAGAGATACCAATGGACTTAATTCGGAGAACAATGAGCTGAAGTTGCGATTGCAAACCATGGAACAACAAGTTCACTTGCAAGATGCATTAAATGATGCGTTGAAAGAGGAAATTCAGCATTTGAAAATACTGACCGGTCAAGCTATGCCACCTAATAATGGAGGGCCTATGATGAACTTTGCTTCTTTTGGAGGGGCGCAATTCTACCCGAATAATCATGCGATGCACACACTTCTAGCTGCCCAGCAATTTCAACAGCTCCAGATTCATCCCCAGAAGCAGCAGCAGCAGCATCAGTTTCAGCAGCTTCAGCAACAGATGTTGCAGCAACAGCAGGAACAGATGCATCAACAGTCAGGAGAATTGAAAATTAGGTCATCTACACCTTCTCCTGGCCCCAAAGATAATGCATCATCAGATGTAAATCCTTCAATGGGCAAGGATTGTTGA 1293 0.4594 MDKDKPLVHGGGLPPPSGRYSGYSPTGNAFNVKSEPSSSSSYPPMVPGSSPDSSHFGHGMSSDSSGFSHDISRMPDNPPRNRGHRRAHSEILTLPDDISFDSDLGVVGGADVPSFSDDTEEDLLSMYLDMDKFNSSSATSTFQMGEPSNAAAASGSVPTSTPTSGGPTSSAENSVLGNNERPRVRHQHSQSMDGSTTIKPEMLVSGSEDISAADSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLNSENNELKLRLQTMEQQVHLQDALNDALKEEIQHLKILTGQAMPPNNGGPMMNFASFGGAQFYPNNHAMHTLLAAQQFQQLQIHPQKQQQQHQFQQLQQQMLQQQQEQMHQQSGELKIRSSTPSPGPKDNASSDVNPSMGKDC* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0298 430 MobiDBLite consensus disorder prediction 388 430 - -
Ahy18g0298 430 Pfam bZIP transcription factor 233 291 IPR004827 GO:0003700|GO:0006355
Ahy18g0298 430 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 422 - -
Ahy18g0298 430 Coils Coil 249 318 - -
Ahy18g0298 430 Coils Coil 374 394 - -
Ahy18g0298 430 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 422 - -
Ahy18g0298 430 MobiDBLite consensus disorder prediction 21 71 - -
Ahy18g0298 430 SUPERFAMILY Leucine zipper domain 233 287 IPR046347 GO:0003700|GO:0006355
Ahy18g0298 430 SMART brlzneu 229 293 IPR004827 GO:0003700|GO:0006355
Ahy18g0298 430 Gene3D - 232 285 - -
Ahy18g0298 430 MobiDBLite consensus disorder prediction 137 177 - -
Ahy18g0298 430 MobiDBLite consensus disorder prediction 1 117 - -
Ahy18g0298 430 MobiDBLite consensus disorder prediction 137 197 - -
Ahy18g0298 430 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 231 294 IPR004827 GO:0003700|GO:0006355
Ahy18g0298 430 MobiDBLite consensus disorder prediction 75 92 - -
Ahy18g0298 430 MobiDBLite consensus disorder prediction 388 424 - -
Ahy18g0298 430 CDD bZIP_plant_RF2 234 283 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0298 Ahy-Chr18 2473892 2476981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0298 19 362 bZIP Transcription Factor Family AT1G06070 72.493 1.17e-168 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy18g0298 bZIP_1 5.90E-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0298 - - gmx:100786738 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0298 18 2473892 2476981 Ahy18g0298 18 2473892 2476981 ECH
Ahy18g0298 18 2473892 2476981 Ahy8g1093 8 25972826 25975926 hybridization
Ahy18g0298 18 2473892 2476981 Ahy13g0607 13 6320620 6323487 PCT
Ahy13g0607 13 6320620 6323487 Ahy18g0298 18 2473892 2476981 PCT