Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0277 ATGAACTTGGGTGCTGCCAAGGAAGAATCGACACCAGAGGTTCATGTCCCAGCCGATATTGATTGGCAGAAGCTCGATAAATCCAAGTTCTTCTTCCTCGGCGCAGCACTTTTCTCTGGGGTTTCAGCAGCACTGTACCCCGTTGTGGTATTGAAAACGAGGCAGCAAGTTGCTCAGTCCCAAGTTCCTTGCATCAAGACTGCATTTTCAGTGATTAGCCATGAGGGTTTTCGAGCATTGTATAGAGGGTTTGGTACCTCTTTGATGGGAACAATCCCTGCTAGAGCCATGTACATGGCTGCTTTAGAGATCACTAAGAGTAATGTAGGCACTGCCACTGTTAGGTTTGGGATAGCTGAGCCGACTGCGGCCACGATTGCCAATGCGGTGGCCGGACTGAGTGCAGCCATGGCAGCTCAGCTTGTGTGGACCCCGGTCGACGTAGTGAGCCAGAGGCTAATGGTTCAAGATGGTTCCAATGCAAGACAATATGCCAATGGGATTGATGCATTCAGGAAGATTCTCAGAACAGATGGTCCTAGAGGGTTGTACAGAGGTTTTGGGATATCAATTTTGACATATGCACCTTCAAATGCTGTTTGGTGGGCTTCATATTCTGTTGCACAGAGAATGGTTTGGGGTGGTGTTGGATACTACTTGTGCAGCAATAAGAAGGATGATGGTGAGACAACAAATGAACTGAGGCCGGATTCGAAGACAGTAATGGCAGTTCAGGGAGTCAGTGCAGCAATGGCTGGTGGCATGTCCGCATTAATCACCATGCCATTGGATACAATTAAGACAAGGCTGCAGGTCTTGGATGGTGATGAGAATGGGAATGGGCGTAGAGTACCAACGGTTGTTCAGACAGTGAGGAATTTAGTTAAGGAAGGTGGTTGGATGGCATGTTACAGAGGTTTGGGACCAAGATGGGCTTCAATGTCTTTGTCTGCAACAACAATGATCACTACTTATGAGTTCCTTAAACGACTTTCTACAAAGAATCAGGATGTTTTGACATGA 1023 0.4721 MNLGAAKEESTPEVHVPADIDWQKLDKSKFFFLGAALFSGVSAALYPVVVLKTRQQVAQSQVPCIKTAFSVISHEGFRALYRGFGTSLMGTIPARAMYMAALEITKSNVGTATVRFGIAEPTAATIANAVAGLSAAMAAQLVWTPVDVVSQRLMVQDGSNARQYANGIDAFRKILRTDGPRGLYRGFGISILTYAPSNAVWWASYSVAQRMVWGGVGYYLCSNKKDDGETTNELRPDSKTVMAVQGVSAAMAGGMSALITMPLDTIKTRLQVLDGDENGNGRRVPTVVQTVRNLVKEGGWMACYRGLGPRWASMSLSATTMITTYEFLKRLSTKNQDVLT* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0277 340 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 337 - -
Ahy18g0277 340 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 337 - -
Ahy18g0277 340 SUPERFAMILY Mitochondrial carrier 23 328 IPR023395 -
Ahy18g0277 340 Gene3D Mitochondrial carrier domain 29 338 IPR023395 -
Ahy18g0277 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Ahy18g0277 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 211 IPR018108 -
Ahy18g0277 340 Pfam Mitochondrial carrier protein 243 335 IPR018108 -
Ahy18g0277 340 Pfam Mitochondrial carrier protein 39 108 IPR018108 -
Ahy18g0277 340 Pfam Mitochondrial carrier protein 125 212 IPR018108 -
Ahy18g0277 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 240 331 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0277 Ahy-Chr18 2308183 2310000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0277 1 337 Chloroplast and Mitochondria Gene Families AT1G72820 74.636 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0277 K15121 - gmx:100784616 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0277 18 2308183 2310000 Ahy18g0277 18 2308183 2310000 ECH