Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0275 ATGTCTAGCAGCACAGCTGGTCGAGTCATCAAGTGCAGAGCTGCGGTTGCATGGGAAGAAGGGAAGCCACTGGCCATAGAAGAAGTAGAGGTAGCACCACCAGAGGCCGGTGAAGTTCGCTTGAAGATCCTCTACACTAGTCTTTGTCATTCTGATCTTTACTTCTGGAAGAGCAAGGGGGGTAGGAATTTGTTGTTTCCTCGCATACTCGGTCATGAAGCTGCAGGGATTGTGGAGAGCATAGGGGAGGGTGTGACAAATCTGAAGCCAGGAGATCATGTGCTACCTGTGTTCACCGGAGAGTGTGGCGAATGCCGAAGCTGCAAGTCTGAAGAGAGCAACCTCTGTGAAGTCCTCAGGCTCAACACTGATACTGGTGTCATGCTAAGTGATGGAAAATCAAGATTCTCCAAAGATGGAAAACCCATTTACCACTTCCTTGGAACTTCCACATTCAGTGAATACACTGTCTCACATGCTAAGTGTGTTATAAAGATCAACCCTGCTGCCCCACTTGACAAAGTTTGTGTTCTCAGTTGTGGAATCTGCACAGGACTTGGTGCAACCTTAAATGTGGCAAAACCAAAGCCCGGTTCTACTGTTGCTGTCTTTGGATTGGGAGCAGTTGGTCTTGCTGCTGCTGAAGGGGCAAGGCTTTCTGGTGCATCAAGAATCATTGGAGTTGATATACTTTCTAGCAGACAGGAACAAGCCAAAAGTTTTGGAATCACTGACTTTGTGAACCCAAAAGATCATGACAAACCTGTGCAACAGGTGATTGTTGAAATGACCGATGGAGGAGTTGATCGCGCTCTAGAATGCACTGGACACGTAGAAGTCGCGATTGCAGCATTTGAATCTGTTCATGATGGTTGGGGTGTTGCTGTGCTTGTTGGTCTACCAAGCAGTGAAGATGAATTCAAAACAAAATCCATCAACTTATTGTATGAGAGGACTGTTAAGGGTACCTTCTATGGAAACTACAAACCACTCTCTGATATTCCCTCTGTTGTGGAGAAGTACATGAACAAAGAGCTAGAATTGGAGAAATTCATCACTCACTCAATCCCATTCTCTGAGATCAATAAATCATTTGATTTAATGCTGAAAGGAGAGTCAATTAGGTGCCTCATCTGCATGGAAGGCTGA 1149 0.4552 MSSSTAGRVIKCRAAVAWEEGKPLAIEEVEVAPPEAGEVRLKILYTSLCHSDLYFWKSKGGRNLLFPRILGHEAAGIVESIGEGVTNLKPGDHVLPVFTGECGECRSCKSEESNLCEVLRLNTDTGVMLSDGKSRFSKDGKPIYHFLGTSTFSEYTVSHAKCVIKINPAAPLDKVCVLSCGICTGLGATLNVAKPKPGSTVAVFGLGAVGLAAAEGARLSGASRIIGVDILSSRQEQAKSFGITDFVNPKDHDKPVQQVIVEMTDGGVDRALECTGHVEVAIAAFESVHDGWGVAVLVGLPSSEDEFKTKSINLLYERTVKGTFYGNYKPLSDIPSVVEKYMNKELELEKFITHSIPFSEINKSFDLMLKGESIRCLICMEG* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0275 382 SUPERFAMILY GroES-like 5 188 IPR011032 -
Ahy18g0275 382 SUPERFAMILY GroES-like 331 378 IPR011032 -
Ahy18g0275 382 Pfam Alcohol dehydrogenase GroES-like domain 37 166 IPR013154 -
Ahy18g0275 382 PANTHER ALCOHOL DEHYDROGENASE 5 379 - -
Ahy18g0275 382 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Ahy18g0275 382 Gene3D - 185 323 - -
Ahy18g0275 382 PANTHER ALCOHOL DEHYDROGENASE-RELATED 5 379 - -
Ahy18g0275 382 CDD alcohol_DH_plants 10 378 - -
Ahy18g0275 382 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 171 344 IPR036291 -
Ahy18g0275 382 Pfam Zinc-binding dehydrogenase 208 328 IPR013149 -
Ahy18g0275 382 Gene3D - 21 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0275 Ahy-Chr18 2296056 2298428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0275 38 372 Monolignol Biosynthesis Gene Families AT1G72680 26.765 3.42e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0275 K18857 - gmx:100800668 603.979