Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0274 ATGCCAAGAACCCAATTACGCAAAATTGATGGCCTTAGAGAAGTAGAAGATTTCGGAAGGACCGTTCCTTTTGAGTTGACTGTCTATCCTGGAGAGGATGTTGTCGCAAAGCTGTGGAAGGTTTGGGAAGCAAGTACTCACTCTAGCTATGCAATTGCAGCCTTCGGTCATATATCAAAAGCCGCAATTGGCAAACCAAACTCAGATTTGTTTCGTATATATGAAGGAGACTTTGAGATTCTGTCTCTGTCTGGACATTATGTGAATGAAGAGGATGGTTCTGCAGATTGGCGTTTGGGCATCACACTGGCTGATTCTGACAGTGATAGAGAGGCTTTTGGTGGCAGCTCCATCAATACATTGATAGCTTCTGACATTGTATCTGTACGTATTATAAACTTTGAGAAAGAAGAAGAAAAGAGCGATGAAACTGGAACTTCCTCTACAATTGGTGGGGTGCTGATGTCCCTGCTCCTTGCTCTTGAGAAGAAAATAATGGGATTCTTTTCGGATCCGATGGTCAACGAGAGTGATAAGGAAAACTAA 546 0.4267 MPRTQLRKIDGLREVEDFGRTVPFELTVYPGEDVVAKLWKVWEASTHSSYAIAAFGHISKAAIGKPNSDLFRIYEGDFEILSLSGHYVNEEDGSADWRLGITLADSDSDREAFGGSSINTLIASDIVSVRIINFEKEEEKSDETGTSSTIGGVLMSLLLALEKKIMGFFSDPMVNESDKEN* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0274 181 CDD DUF296 23 124 IPR005175 -
Ahy18g0274 181 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 7 26 143 - -
Ahy18g0274 181 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 26 143 IPR039605 GO:0003680
Ahy18g0274 181 ProSiteProfiles PPC domain profile profile. 18 156 IPR005175 -
Ahy18g0274 181 Gene3D - 24 154 - -
Ahy18g0274 181 SUPERFAMILY AF0104/ALDC/Ptd012-like 23 144 - -
Ahy18g0274 181 Pfam Plants and Prokaryotes Conserved (PCC) domain 24 135 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0274 Ahy-Chr18 2287842 2289310 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0274 22 168 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 33.553 1.93e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0274 - - aip:107613024 359.762