Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0271 ATGGCTGCGCATGCTTCTTCTGAGATTATTAAGTATGATGTCTTCCTTAGCTTCAGAGGCACAGACACTCGCTGTAGTTTTCTCAGCCATCTGCGCAAGGCTTTAGAGGACGCGCACGTCAAGACATACGTGGATTACATGCTCAGAGAAGGAACTGAAATATCACACTCACTCCTTGCAGCCATTGAACAATCAGAAATTGCTTTGATCATATTCTCCCAGGATTATGCTTCTTCCAAATGGTGTTTGGAAGAACTAGCCAAAATAATGGAATGCAGCAAACAAAATGGTCAAATTGTAATACCTATTTTCCATAATGTAGACCCATTATGGGTGCGCCACCAAAAGGAAAGTTATCACCACGCCCTTGCTAATCATGAGGTGAGGTTTGCAGACAGGGTGCAAATCTGGAGAGATGCTCTCAAGGAAGCTGCCAATTTGTCTGGATTCGATTCACAGTCAAGATTCAAGGATGATGCTCACCTTGTTGGTGAAATTGTCAAACGTGTCTTACAAAGGTTAAACCAATCACCCCAAGGTGATTTGCAGGGTCTTGTTGGAATTCATGGACCAATTGAAAAGCTAGTTTCGTTGTGCACGGAATCTGAAGCTGTTATTATTGGCCTTTGGGGCATGGGCGGTGTTGGTAAGACAACTCTTGCGACTGCAGTTTTCAATAGATTGTGTGATGGATTTGAAGGATTTTGCTTTTTGAAAAATGTAAGAGAAAGAGCTGAGAAATATGGTATAGATCATTTGAAGACAGAACTTCTTTCCAAACTGCTAAAGGAAGATGCAACTCCCTTTGTCACGCCTGGTGGGATAACTAATTTTGCCAAGAAAAGACTTAGTCGAACAAAGGTTCTTGTTGTTCTTGATGATGTCAATGATTCAGACCAAATGGAAGATTTATGTGGAGGACATACACGGTTTGGGGCAAGTAGCAGAATCATAGTGACAACAAGAGATAAGCATGTCCTTCTTAGGGCGGATGCTGATCATATTCATCAAGTTAAGACGTTGAATTCTGATGATTCCCTTCAGCTTTTCAGCCTGAATGCCTTCAAGCAAAACTGCATTATAAAAGCAGAACAAGTTGAGTTGTCCAAGAGAGTGCTTAACTATTGCAAAGGCCTTCCTTTAGCAATAAAAATCTTGGGTTCCTTCCTTAAAGGAAAAACTCAACAAGAGTGGGAAAGTGAACTGGCCAAACTTGAAAAGATGCCTGATGAAAAAATCCAAAGTATATTGCGATTGAGTTATAATGAATTAGATCGTAATGATCGGAATATATTTTTGGAACTTGCATGTTTCTTTGATAGAAATACAGAAGAAGAGCAGATAAAATCTCTTCTTGATCGCTGTGGATACACAACTACTATCGGCTTGACAAATCTTTGTAATAAAGCTCTTATTTCCATTTCAAACGATTGTGTGTCAATGCATGACTTAATTCGAGAAATGGGCCGTGAAATTGTTCGCGGAGAATGTCTAGATGATCCAGGAAAACGCAGTAGACTATGGCATTCTTATGATACCTATGAAGTACTGAAATACAATAAGGGAACTCAAGCTATTCAAAGTATCACATTAAATATGTCTGAAATTGATATGATAAGGTTGCACCCTGAGACATTTGAAAGAATGCCAGAACTGAAGCTTGTTAGATTTCATTCATCCAATTCCAAAAACAAGTTGTGTGCTCCAGAAGGTATTACATCCCTGCCAAAGAAGTTAAGGTATTTTCATTGGGATGGGTTTCCTTTGAAATCTTTGCCGTCTTCTTTTGGTGCTGAGAGATTTGTTGAAATCATAATGCCCAATAGTGGATTGCAAACGCTTTGGGAAGGTGAACAGAATCTTGTAAATCTAAGGAAAGTGGATCTTGATGGTTCATCAAGCCTAATGGAGCTCCCAGATTTATCAAAAGCTTCAAATCTTAGAGAAGTGAGTATCTCTGGTTGCAAGAGTCTGCGTCAAGTTCCTCCATCTGCTGTGTGTTCCCAGAAGCTGAAATACCTGAAAGTGAGCAACTGTGAGAGCCTTGAATCCATAGCAGAGCTTCCAGCATCGGTTGTGTGCGTAATTGCTCGCAACTGCCGCTCACTACACACTGTATCTTTATCTGCTTTGGATTCTATGGCCAAAGAACCGATCCAGCAGCAGCAATTTGAGGATATAACCTTCAATTTCACCAACTGCAACAAATTGAGAAGGAATTCAAAAAAGAGCATTATGGAACATGCCTATGGCAGACTAAAGCGACCACTAGCAGCAGCACCAACATGTGCTACAACAGCATGGCTGGATAAGGAGGATAAGCACCCGTTTCGTTATCTTTCAGGCAAGCAGCACAATCATCCCAAGTTAAATGTGTTGTCAGGTGCAGCCCCGGAATGGTTCAGATATAAAAACCCACAAAGAGGGGCTGTTACTCTTGATGTTGCCCCAGGTGATAACTTGTTGGGTTTCATCTTTTGGATCATTTTTCCTGCATACTATGGGAGTCACGAAGTGCAAGCCACTTCAGTGTCATATAAGTATCGCGTTAAAGTGATGCATGGCCCAAGTTTCAGCTATGACGGGTATTGGTTTCTAGGCGAGAATATATGGCTTAACGATAGCTATTTTTGGTACGACGGGCAATGCTGCATTGACATGATCAAGGTAATGGAAGAAAACACCGACACTAATAATAATAATAGCATTCAACTCATGGTTTCATTCCAGTTCTTCTACACTCGTCTTGTTTTGAGTTACCGTTACCCTATTGAGGAAGATGTTAACAAAGAAATAGAAGATTGGGCTGTGCACCCAATATATGCCTCAGACGTTCGAAACTTCAAAGATTGGAGTGTGCATCCAATATATGCCTCAGATGTTCGAAACTGA 2892 0.4077 MAAHASSEIIKYDVFLSFRGTDTRCSFLSHLRKALEDAHVKTYVDYMLREGTEISHSLLAAIEQSEIALIIFSQDYASSKWCLEELAKIMECSKQNGQIVIPIFHNVDPLWVRHQKESYHHALANHEVRFADRVQIWRDALKEAANLSGFDSQSRFKDDAHLVGEIVKRVLQRLNQSPQGDLQGLVGIHGPIEKLVSLCTESEAVIIGLWGMGGVGKTTLATAVFNRLCDGFEGFCFLKNVRERAEKYGIDHLKTELLSKLLKEDATPFVTPGGITNFAKKRLSRTKVLVVLDDVNDSDQMEDLCGGHTRFGASSRIIVTTRDKHVLLRADADHIHQVKTLNSDDSLQLFSLNAFKQNCIIKAEQVELSKRVLNYCKGLPLAIKILGSFLKGKTQQEWESELAKLEKMPDEKIQSILRLSYNELDRNDRNIFLELACFFDRNTEEEQIKSLLDRCGYTTTIGLTNLCNKALISISNDCVSMHDLIREMGREIVRGECLDDPGKRSRLWHSYDTYEVLKYNKGTQAIQSITLNMSEIDMIRLHPETFERMPELKLVRFHSSNSKNKLCAPEGITSLPKKLRYFHWDGFPLKSLPSSFGAERFVEIIMPNSGLQTLWEGEQNLVNLRKVDLDGSSSLMELPDLSKASNLREVSISGCKSLRQVPPSAVCSQKLKYLKVSNCESLESIAELPASVVCVIARNCRSLHTVSLSALDSMAKEPIQQQQFEDITFNFTNCNKLRRNSKKSIMEHAYGRLKRPLAAAPTCATTAWLDKEDKHPFRYLSGKQHNHPKLNVLSGAAPEWFRYKNPQRGAVTLDVAPGDNLLGFIFWIIFPAYYGSHEVQATSVSYKYRVKVMHGPSFSYDGYWFLGENIWLNDSYFWYDGQCCIDMIKVMEENTDTNNNNSIQLMVSFQFFYTRLVLSYRYPIEEDVNKEIEDWAVHPIYASDVRNFKDWSVHPIYASDVRN* 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0271 963 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 150 IPR035897 -
Ahy18g0271 963 Pfam NB-ARC domain 193 425 IPR002182 GO:0043531
Ahy18g0271 963 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 708 IPR044974 GO:0006952
Ahy18g0271 963 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 434 IPR027417 -
Ahy18g0271 963 PRINTS Disease resistance protein signature 376 390 - -
Ahy18g0271 963 PRINTS Disease resistance protein signature 619 635 - -
Ahy18g0271 963 PRINTS Disease resistance protein signature 282 296 - -
Ahy18g0271 963 PRINTS Disease resistance protein signature 206 221 - -
Ahy18g0271 963 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 8 708 - -
Ahy18g0271 963 Gene3D - 172 337 IPR027417 -
Ahy18g0271 963 Pfam Leucine Rich Repeat 602 619 IPR011713 -
Ahy18g0271 963 Gene3D - 9 171 IPR035897 -
Ahy18g0271 963 Gene3D - 340 425 IPR042197 -
Ahy18g0271 963 SUPERFAMILY L domain-like 493 710 - -
Ahy18g0271 963 Gene3D Ribonuclease Inhibitor 517 739 IPR032675 -
Ahy18g0271 963 ProSiteProfiles TIR domain profile. 10 174 IPR000157 GO:0007165
Ahy18g0271 963 SMART till_3 11 147 IPR000157 GO:0007165
Ahy18g0271 963 Pfam TIR domain 11 187 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0271 Ahy-Chr18 2265634 2277914 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0271 12 718 WRKY Transcription Factor Family AT4G12020 30.844 1.08e-90 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0271 - - adu:107461399 1828.91