Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0253 ATGGGTGCTCCGGCAAGATGGTTCAAATCATTTCTATCTCTGAAAAAGATCTCAACTACTGATCAAGAGAAGGTTAGCTCTGATAACAAGAGTAAGAAGAAGTGGAAGATATGGAAGAACTCTTCAGAATTGAAGAAGGGTGCTACTGCTGTTGCTTCTGCTTCTCACAAATCTGATTCTTCTTCCTTCACTTCTGCCATGGCTGCACTTGTTCGAGCTCCACCCAAAGATTTCAAGCTCATCAAGCATGAATGGGCTGCCATACGCATTCAGGCAGTCTTTCGAGCTTTTTTGGCTAGGAGAGCTTTGAGAGCCTTGAGGGCAGTGGTAAGGTTGCAAGCTATATTTCGAGGCCGGTTAGTTCGAAAGCAAGCGGTTGTTACTCTAAGGTGCATGCAGGCTCTTGTTAGAGTTCAGGCACGCGTAAGGGCAAGGAAAGTGAGGAACTCTCCAGAAGGGAAGGCAGTGCAGAAATTGTTGGATGAACATCGAAACCTTGCTGATCCAGTTAAGCAGGCTGAGCAAGGATGGTGTGACATTCCTGGGACTGCAGATGAAGTTAAAGCAAAGCTGAGAATGAGGCAGGAAGGAGCCATCAAAAGGGATAGAGCAATGGCATACTCTCTCTCCACACAGCATTCAAGAGGGTGTGCTAGTCCAAACTCAAGAGCCTCTAAGGCAGAGGCAATGACTCATTTCAAGCATCAGAACCTAGACAGTAAGAGCTTAGGAAGCAGCTTGTTAGAACACTGGATGGCATCAAAGCCATGGGAGAGTCCAATGTCCAAGAAAAGTGATGATCACATTGTTCAATCAAGAAGGAATGGTGTGACAACCAGGATCTCAGTGAAATCTCTTCCAACAAGTCATTCGACTCCATCGTCTTCGGCGATAAGCTCTGATTGCATGTATGATGATAATAGTCCTGCATCAACATGCACATCAGAGGAAAGAGATGTTGTTCATAAGCCTAGCTACATGAATTTGACAAAATCAACCAAAGCAAAATTGAAGGCTTGCAGGAGTTCTTCACAGAATTCAAAGGATTCTTGTGTGTCTCATAGCACAACACTTGTGAATGGAGATGCTAGTAACAGTGCTGTCTCTGATCCATCAGTTAACTTGTGGAATGGTCTTTGTTCAACACCTCTAAGGGCAAGTTATCAAAGAAGATATGGTAGGAGCCTAGGAGGTAGATAA 1200 0.445 MGAPARWFKSFLSLKKISTTDQEKVSSDNKSKKKWKIWKNSSELKKGATAVASASHKSDSSSFTSAMAALVRAPPKDFKLIKHEWAAIRIQAVFRAFLARRALRALRAVVRLQAIFRGRLVRKQAVVTLRCMQALVRVQARVRARKVRNSPEGKAVQKLLDEHRNLADPVKQAEQGWCDIPGTADEVKAKLRMRQEGAIKRDRAMAYSLSTQHSRGCASPNSRASKAEAMTHFKHQNLDSKSLGSSLLEHWMASKPWESPMSKKSDDHIVQSRRNGVTTRISVKSLPTSHSTPSSSAISSDCMYDDNSPASTCTSEERDVVHKPSYMNLTKSTKAKLKACRSSSQNSKDSCVSHSTTLVNGDASNSAVSDPSVNLWNGLCSTPLRASYQRRYGRSLGGR* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0253 399 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 126 IPR027417 -
Ahy18g0253 399 Pfam IQ calmodulin-binding motif 107 124 IPR000048 GO:0005515
Ahy18g0253 399 Pfam IQ calmodulin-binding motif 85 104 IPR000048 GO:0005515
Ahy18g0253 399 ProSiteProfiles IQ motif profile. 83 111 IPR000048 GO:0005515
Ahy18g0253 399 Gene3D - 82 131 - -
Ahy18g0253 399 ProSiteProfiles IQ motif profile. 107 134 IPR000048 GO:0005515
Ahy18g0253 399 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 393 - -
Ahy18g0253 399 PANTHER IQ-DOMAIN 5-RELATED 1 393 - -
Ahy18g0253 399 SMART iq_5 82 104 IPR000048 GO:0005515
Ahy18g0253 399 SMART iq_5 105 126 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0253 Ahy-Chr18 2061750 2063905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0253 1 379 IQD Protein Family AT1G72670 46.959 3.31e-95 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0253 - - adu:107461327 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0253 18 2061750 2063905 Ahy8g1040 8 25244429 25246545 hybridization
Ahy18g0253 18 2061750 2063905 Ahy9g0502 9 6663495 6666768 PCT