Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0248 ATGGCGGGTTTGGCTCCTGAAGGAACACAATTCGATGCTCGGCAATATGATTCTAAGATGAATGATTTGCTTTCTGCCGATGGGCAAGAATTCTTCACCTCATATGATGAAGTCTATGATAGTTTTGATGCAATGGGATTACAAGAAAATCTTCTCAGAGGCATATATGCTTATGGTTTTGAGAGGCCTTCTGCAATACAGCAAAGGGGAATTGTTCCTTTCTGCAAAGGTTTAGATGTGATTCAGCAGGCTCAATCTGGAACTGGCAAGACAGCAACATTCTGTTCTGGAATTTTGCAGCAGCTTGATTATGGAGTGGTTCAGTGTCAGGCTTTGGTTTTGGCACCAACAAGGGAGCTGGCACAGAAAATTGAGAAGGTTATGCGAGCACTTGGTGATTACCTTGGTGTCAAGGTTCATGCTTGTGTTGGTGGGACAAGTGTTCGCGAGGATCAGCGCATTCTCCAGGCCGGTGTCCACACTGTTGTTGGCACTCCCGGCCGTGTTTTTGACATGCTGCGGAGACAGTCTCTTCGCCCAGATTACATAAAGATGTTTGTTTTGGATGAGGCAGATGAAATGCTTTCTCGTGGTTTCAAAGACCAGGTTTGCGCTTAA 618 0.4547 MAGLAPEGTQFDARQYDSKMNDLLSADGQEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGVVQCQALVLAPTRELAQKIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQVCA* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0248 205 Pfam DEAD/DEAH box helicase 65 203 IPR011545 GO:0003676|GO:0005524
Ahy18g0248 205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 203 IPR027417 -
Ahy18g0248 205 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 71 205 IPR014001 -
Ahy18g0248 205 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 187 195 IPR000629 -
Ahy18g0248 205 SMART ultradead3 59 203 IPR014001 -
Ahy18g0248 205 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 6 203 - -
Ahy18g0248 205 Gene3D - 12 205 IPR027417 -
Ahy18g0248 205 PANTHER - 6 203 - -
Ahy18g0248 205 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 40 68 IPR014014 GO:0003724
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0248 Ahy-Chr18 2040611 2041639 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0248 1 203 Eukaryotic Initiation Factors Gene Family AT3G13920 87.745 1.36e-129 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0248 K03257 - gmx:100809395 398.282