Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0238 ATGCATCTTCTTCCAATTCACTCAGCTACTCAAATCATGGCGACAAAGGACTCATCATCGGAATTAGAATCACCAAGAAGGCTTCAATACCCACTCGACTCCACCTCATACAAGCTCCTCGACGAGATCGGTTCCGGCGTCAGCGCCGTCGTCTACAAGGCTATCTGCATCCCCATCAACTCCTCCCTCGTCGCCATCAAATCCATCGACCTCGACGGCTCCCGTCCCGACTTCGACGACGTCCGCCGCGAAGTCAAGACTCTCTCCCTCCTCTCCCACCCCAACATCCTCAACGCACACTGCTGCTTCACCGTCGACCACCGTCTCTGGGTGGTCATGCCCTTCATGGCCGGCGGATCCTTCCAATCCATCATCTCTCATTCCTTCCCGGACGGATTCTCAGAGCCATGCATCGCATTCATCCTCAGAGAGACTCTCAACGCTTTGTCCTATCTCCATAGCCAGGGACATCTCCACAGAGACATCAAAGCCGGTAACATTCTCGTCGATTCCAACGGATCCGTCAAGCTCGCCGATTTCGGCGTCTCCGCTTCCATCTACGAGTCAATCATGAGCTCCTCTTCTTCCTCTTCTTCTTCTTCAAGTGTTCCTGGTTGTTGTTCGTGTTCTTCTCTCATGCTCAAAGATGTCGCCGGAACACCGTATTGGATGGCGCCGGAAGTGATCCACTCCCACGTCGGTTACAGTTTCAAGGCTGATATATGGTCGTTTGGGATCACGGCGTTGGAGTTGGCCCATGGAAGGCCTCCACTCTCTCACCTTCCTCCTTCTAAGTCCATGATTCTCAAGATCACCAAACGCTTTCGGTTCTCCGATCTGGACAAGTTTGGCGGCGGTTCCAGCTCCCATGGTAAGAAATTCTCCAAGAACTTCAAGGACATGGTGGCTTCTTGCCTGGATCAGGATCCGGCTAAGAGGCCTACGGCGGAGAAGCTTCTGAAGCATCCGTTCTTTAGAAACTGTAAGGGATCCGAGTTTTTGGTGAAGAACGTGCTGCATGGGTTGCCAAGTGTTGAGAAGAGGTACAAGGAAATCAGCAAGGCTTCTTCTATGAACAATAATAATGATGATGATGATGATGATGATGATCAAGTGAAGCATGGGAAGTTGATGAAGCAAAGAAGGATAAGTGGGTGGAATTTCAATGAAGATGGATTGGAACTTGAACCTGTGTTCCCAAATGATGAAGATGATGAGGCCAAGGCAACAAGAGAAGTTAAAGGTGAAGAAGGTGAGAATGAGAATAATAATGAAAGGTTAAAGGGTATTGAAGGAGTAGCCATGAATGTGAACAACCGTGATGCCATGTTAGCGACACTCAATGTTCTCAAAGGGAGCTTGGAACAAGAGCTTGGACAAGTCAAGGCCTTGATCAACATCTTACGTGCAGATCGTAATCATCATCAAGATCTTGATCATGATCAGCAGCAGTTGGAGTCACAACTAGACACCTTCAAGCTTCACCTTTCTTGA 1494 0.4913 MHLLPIHSATQIMATKDSSSELESPRRLQYPLDSTSYKLLDEIGSGVSAVVYKAICIPINSSLVAIKSIDLDGSRPDFDDVRREVKTLSLLSHPNILNAHCCFTVDHRLWVVMPFMAGGSFQSIISHSFPDGFSEPCIAFILRETLNALSYLHSQGHLHRDIKAGNILVDSNGSVKLADFGVSASIYESIMSSSSSSSSSSSVPGCCSCSSLMLKDVAGTPYWMAPEVIHSHVGYSFKADIWSFGITALELAHGRPPLSHLPPSKSMILKITKRFRFSDLDKFGGGSSSHGKKFSKNFKDMVASCLDQDPAKRPTAEKLLKHPFFRNCKGSEFLVKNVLHGLPSVEKRYKEISKASSMNNNNDDDDDDDDQVKHGKLMKQRRISGWNFNEDGLELEPVFPNDEDDEAKATREVKGEEGENENNNERLKGIEGVAMNVNNRDAMLATLNVLKGSLEQELGQVKALINILRADRNHHQDLDHDQQQLESQLDTFKLHLS* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0238 497 SUPERFAMILY Protein kinase-like (PK-like) 23 330 IPR011009 -
Ahy18g0238 497 MobiDBLite consensus disorder prediction 402 423 - -
Ahy18g0238 497 Pfam Protein kinase domain 37 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g0238 497 Gene3D Transferase(Phosphotransferase) domain 1 119 376 - -
Ahy18g0238 497 SMART serkin_6 37 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g0238 497 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 23 491 - -
Ahy18g0238 497 Gene3D Phosphorylase Kinase; domain 1 26 115 - -
Ahy18g0238 497 MobiDBLite consensus disorder prediction 396 423 - -
Ahy18g0238 497 PANTHER SERINE/THREONINE-PROTEIN KINASE BLUS1 23 491 - -
Ahy18g0238 497 ProSitePatterns Protein kinases ATP-binding region signature. 43 67 IPR017441 GO:0005524
Ahy18g0238 497 ProSiteProfiles Protein kinase domain profile. 37 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0238 Ahy-Chr18 1915986 1918095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0238 27 494 MAP Kinase Kinase Kinase Kinase AT4G14480 56.263 4.63e-180 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Ahy18g0238 Pkinase 3.40E-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0238 K08835 - adu:107461391 925.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0238 18 1915986 1918095 Ahy8g1026 8 25084974 25087296 hybridization