Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0211 ATGACCACCGTACCGGGACAGCTGGTTTGGGAGATCGTGAAGAAGAACAACTGTTTCTTGGTTAAGGAGTTTGGAAGGGGCACTCAGAGCGTTGAGTTCAGCAGAGAAGCCAACAATCTCTACAATCTCAACTCCTTCAAGTACTCTGGTTTGGCAAACAAGAAAACTGTTACTATTCAGCCAGCTGGAAAAGATCAGGCTGTGTTGCTTGCTACAACAAAGACAAAGAAGCAAAACAAGCCGGCTGCATTGCTTCATAAATCTATCATGAAGAAGGAGTTTCCTAGAATGGCAAAAGCAGTGAAAAAACAGGTTGCAGCTAACTACTACAGGCCTGATCTCACCAAGGCAGCTCTTGCAAGGTTGAGTGCTGTGAATAGGAGCCTCAGGGTTGCAAAGTCTGGTGTCAAGAAGAGAAACAGACAGGCTGTTAAGGTCCATGGCAGGAAGTGA 453 0.4592 MTTVPGQLVWEIVKKNNCFLVKEFGRGTQSVEFSREANNLYNLNSFKYSGLANKKTVTIQPAGKDQAVLLATTKTKKQNKPAALLHKSIMKKEFPRMAKAVKKQVAANYYRPDLTKAALARLSAVNRSLRVAKSGVKKRNRQAVKVHGRK* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0211 150 Gene3D - 6 133 - -
Ahy18g0211 150 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
Ahy18g0211 150 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 1 150 - -
Ahy18g0211 150 PANTHER 60S RIBOSOMAL PROTEIN L28 1 150 IPR002672 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0211 Ahy-Chr18 1678819 1680365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0211 1 143 Cytoplasmic Ribosomal Protein Gene Family AT2G19730 74.825 5.96e-77 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0211 K02903 - gmx:100499921 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0476 19 5752084 5755005 Ahy18g0211 18 1678819 1680365 ECH
Ahy18g0211 18 1678819 1680365 Ahy18g0211 18 1678819 1680365 ECH
Ahy18g0211 18 1678819 1680365 Ahy9g0386 9 4562619 4565556 PCT
Ahy9g0386 9 4562619 4565556 Ahy18g0211 18 1678819 1680365 PCT