Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0206 ATGGATGGTCTGAGTTGGGATCTTTCTTCACAACTTGCTGCTAATAACCTAGCAATGTTGGAAGGAGAAGAAGACTACTCCATCTTTGTTAATAATCACATGCAAGAGATGCACAAGTCTCATCATCGTCATGGATATCCAAATTCTGAAAAAGTGATGATGATGATGATGAGCAACATGGTTCAGTACCCATCATCAGCAACACCAGAAGCTGAGATTGTGAGTTTTCCACAGAGAACAAGAAACAACAACAACAATTTTAGCATGGCGGTGAAATCATCATCATCATCATCAACCGGTTGGGATGTAAAAGAAGCCTTAACATCTAATCACCAATCATGGCCATCACTTTCAGTAGTCAATTATGTGCCAGATTTCAACATGGCCCACCACCACCAACAACAACAACAACAACAACTCATCAACAGCACAACACAATCATCATCATCCCTTGAATCACTCGATTGCTTGCTTTCAGCTACCAACAGCAACACAGACACTACTACTGCTACTACTTCTCTTGAAGAAGATGATGGCATCTCCATCATTCTATCTGACTGCAGAAACTTCTGGAACTTCACTACTAATTATGGAGCCATCACTGCTGCTGCTGCTGCTGCTTCCTCTGCTGAATCTGAAACCAATAATGCTTCCAACAAACAGAACAACATGCAATATCATCACCATCATCAGATCAATAATAACGAGCTCGATGAAACAGTATCTCAAGCTTCAAAGAGGACAATCATCAATGACCAATATGACCTTATCAAAACTTCTTCTGCTGCTGCTGCAACCACCACCACTGGTCCCTACTTCAGTATCTTCCACAATTCTTCTTCTTCCGCCACTGAAAGCGGCGCCTTCAAGCTTATCAAAGAGAATCCTCTACCAAGATCCAAGAAACCAAGATGGGAGAATAACAACAACAACAACAACAACAACAAGCGTGGTGGTTCATCATCCAACATCAACTTCCAGCAGCCGAATTCATCGCATTCCAGCATTGACGAACCAGATCCAGAGGCCATAGCACAGATGAAGGAGATGATATATAGAGCTGCGGCATTTCGGCCTGTGAACTTGGGATTGGAGGTTGCGGAGAAGCCGAAGAGGAAGAACGTGAAGATATCAAGCGATCCTCAAACGGTAGCTGCAAGGCAAAGAAGGGAGAAAATAAGTGAAAGAATTAGGGTTTTGCAGAAGATTGTTCCTGGTGGAAGCAAGATGGACACAGCTTCAATGCTTGATGAAGCTGCAAACTATCTCAAGTTTCTTAGGTCACAGGTCAAAGCTCTTGAAAGCTTAGGGAACAAGCTTGACACCATGAATAATCATAATAATGTTCCTCCTACCACCATTGCTTTCTCTTTCAACCCTTCTTTTCCCATCATGCCATCCTATTTTCCCAACCCTAAACCCTAG 1425 0.4267 MDGLSWDLSSQLAANNLAMLEGEEDYSIFVNNHMQEMHKSHHRHGYPNSEKVMMMMMSNMVQYPSSATPEAEIVSFPQRTRNNNNNFSMAVKSSSSSSTGWDVKEALTSNHQSWPSLSVVNYVPDFNMAHHHQQQQQQQLINSTTQSSSSLESLDCLLSATNSNTDTTTATTSLEEDDGISIILSDCRNFWNFTTNYGAITAAAAAASSAESETNNASNKQNNMQYHHHHQINNNELDETVSQASKRTIINDQYDLIKTSSAAAATTTTGPYFSIFHNSSSSATESGAFKLIKENPLPRSKKPRWENNNNNNNNNKRGGSSSNINFQQPNSSHSSIDEPDPEAIAQMKEMIYRAAAFRPVNLGLEVAEKPKRKNVKISSDPQTVAARQRREKISERIRVLQKIVPGGSKMDTASMLDEAANYLKFLRSQVKALESLGNKLDTMNNHNNVPPTTIAFSFNPSFPIMPSYFPNPKP* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0206 474 MobiDBLite consensus disorder prediction 302 337 - -
Ahy18g0206 474 CDD bHLH_AtIND_like 378 436 - -
Ahy18g0206 474 SMART finulus 383 432 IPR011598 GO:0046983
Ahy18g0206 474 MobiDBLite consensus disorder prediction 295 339 - -
Ahy18g0206 474 Gene3D - 382 449 IPR036638 GO:0046983
Ahy18g0206 474 Pfam Helix-loop-helix DNA-binding domain 387 426 IPR011598 GO:0046983
Ahy18g0206 474 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 383 444 IPR036638 GO:0046983
Ahy18g0206 474 PANTHER TRANSCRIPTION FACTOR BHLH87 87 471 - -
Ahy18g0206 474 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 377 426 IPR011598 GO:0046983
Ahy18g0206 474 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 87 471 IPR045843 GO:0003700|GO:0006355
Ahy18g0206 474 Coils Coil 416 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0206 Ahy-Chr18 1650933 1652702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0206 135 474 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 47.399 2.49e-82 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy18g0206 HLH 1.50E-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0206 - - aip:107612801 837.025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0206 18 1650933 1652702 Ahy18g0206 18 1650933 1652702 ECH
Ahy18g0206 18 1650933 1652702 Ahy9g0368 9 4295603 4298052 PCT
Ahy9g0368 9 4295603 4298052 Ahy18g0206 18 1650933 1652702 PCT