Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0195 ATGGGAAAAGCTAGCAGGTGGTTGAAGGGGTTATTGGGATTGAAGAAGGAGAAGGATAGCTATGACAATTGTGGTTCAATGGCTGCTTCTACTGACAAGAAGGAGAAGAAACGTTGGAGTTTTGCAAAGTCTGCCAAAGATGGAGATTTGACTCAAAATGCTTCTACAAATTATGGAGTCAGGGGCTCTGACTCTGACTCTGCTGATGCTTGGATCAGATCTTGTGCTGCTGAAAAAGGGAATGAGCAGAACAAGAATGCCATAGCCGTGGCAGCCGCCACGGCAGCTGCAGCGGATGCTGCCGTGGCGGCCGCCAATGCTGCCATGGCAGTTGTGAGGCTAACAAGCCATGGAAGAGGAACATTGTTTAGTGGAAGCAGGGAGAAGTGGGCTGCATTGAAGATCCAATCTTATTTCAGAGGTTACTTGGCTAGGAAGGCTCTTAGAGCACTCAAAGGATTGGTTAAGATACAAGCTCTAGTTAGAGGGTATCTAGTTAGGAAAAGGGCTGCTGCAACTCTTCACAGTATGCAAGCTCTAATAAGAGCTCAGGTTGCCGCGAGAGCTCGCCGTTCGATGATCAAGGCGAATAGGTTTCAGCCTCAAACTCCTGGAAGAAGATATGTGCAATGGTATGATGAAACAAGAAGTGAGTTCCATAGTAAGAGGCTACTACCAACAAGCAAATCCTATGAAACATCCTTAAATATGAAAGGATTTGATGAGAGCCCCAAGAATGTTGAAATTGATACATACAGGCCACAATCAAGATCAAGGAGAATCACAACAACTACTATGTCTGAGACTCAAGAAGACCACCTTCACTATCAAGCAATCTCAGTTCTTGAATGCAGGCATCCTCCTCAGCATTTGGAATGGTACTCGAACACGGATGAATGTGAGATCGCGACAGCTCGCAGCACGCCTCGTCTGGCGAATGCTCCGGCTACACCGGTGAAGAGTGTTTGTGGAGACTCCTTTAGGCCTTACTGCAATTCCCCTAACTACATGGCCAATACTCAGTCATATAAGGCAAAGGTTAGGTCTCATAGTGCTCCAAAGCAAAGGCCTGAGCCTAAGAAGAGGTTTTCACTCACTGAAATAATGGCAGCAAGAAATAGCACTAGTGGTGTTAGAATGCATTGGTCATCCAAATCACACTCTCAAGATTATTGCAGTTTTGACAGAGTTGAGAGCAAACTGAAATAG 1209 0.4574 MGKASRWLKGLLGLKKEKDSYDNCGSMAASTDKKEKKRWSFAKSAKDGDLTQNASTNYGVRGSDSDSADAWIRSCAAEKGNEQNKNAIAVAAATAAAADAAVAAANAAMAVVRLTSHGRGTLFSGSREKWAALKIQSYFRGYLARKALRALKGLVKIQALVRGYLVRKRAAATLHSMQALIRAQVAARARRSMIKANRFQPQTPGRRYVQWYDETRSEFHSKRLLPTSKSYETSLNMKGFDESPKNVEIDTYRPQSRSRRITTTTMSETQEDHLHYQAISVLECRHPPQHLEWYSNTDECEIATARSTPRLANAPATPVKSVCGDSFRPYCNSPNYMANTQSYKAKVRSHSAPKQRPEPKKRFSLTEIMAARNSTSGVRMHWSSKSHSQDYCSFDRVESKLK* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0195 402 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 127 170 IPR027417 -
Ahy18g0195 402 SMART iq_5 127 149 IPR000048 GO:0005515
Ahy18g0195 402 SMART iq_5 150 171 IPR000048 GO:0005515
Ahy18g0195 402 Pfam Protein of unknown function (DUF4005) 308 377 IPR025064 -
Ahy18g0195 402 ProSiteProfiles IQ motif profile. 128 156 IPR000048 GO:0005515
Ahy18g0195 402 Gene3D - 125 181 - -
Ahy18g0195 402 PANTHER PROTEIN IQ-DOMAIN 14-LIKE 1 386 - -
Ahy18g0195 402 PANTHER IQ-DOMAIN 5-RELATED 1 386 - -
Ahy18g0195 402 Pfam IQ calmodulin-binding motif 130 149 IPR000048 GO:0005515
Ahy18g0195 402 Pfam IQ calmodulin-binding motif 155 169 IPR000048 GO:0005515
Ahy18g0195 402 ProSiteProfiles IQ motif profile. 152 179 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0195 Ahy-Chr18 1529464 1531265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0195 1 380 IQD Protein Family AT3G16490 51.263 3.48e-91 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0195 - - gmx:100797686 404.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0195 18 1529464 1531265 Ahy18g0195 18 1529464 1531265 ECH
Ahy18g0195 18 1529464 1531265 Ahy9g0318 9 3626419 3631237 PCT
Ahy9g0318 9 3626419 3631237 Ahy18g0195 18 1529464 1531265 PCT