Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0187 ATGACTCGGCGGTGCTCACACTGTAGCAACAACGGCCACAATTCCAGGACATGCCCCAACCGCGGCGGCGGCGGCGGAGGCGGCGGAGGAGTGAAGCTGTTCGGTGTGAGGCTGACGGATGGATCAATCATAAAGAAGAGTGCGAGTATGGGGAATCTCATGACGCTTCACCACCATTGTTCGTCTCCTTCTTCCTCCTTTGTGGCCGCCGCCGGCGATAACCCAGGCTCGCCTGACCCTGTCGGTTACTTGTCCGACGACCCTGCCCACGCCTCGTCCTTCGCCAACCGCCGTGGCGAAAGAAAGAAAGGTGTTCCATGGACCGAAGAAGAACATCGGATGTTCTTAGTTGGTCTGCAAAAGCTGGGGAAAGGAGATTGGCGTGGAATATCACGTAATTTTGTTGTATCAAGGACCCCTACTCAAGTAGCAAGTCATGCCCAGAAGTATTTTATCCGACAGAGTAATGCTACCCGGAGAAAGAGGCGTTCCAGCCTCTTTGACATGGCTCCGGATATGCCTACGGATCCGCCTTCGGTGCTGGAAAAACAAGTACTGCTTCTGACCTCTGAGAACTCACAATCTCCCAATGTAAAATCACAACCTTCATTAAATCTATCTCTCAAATCTGAAGTTGACCCCATGGAAATTGCTTCTGAAGAAAATGTGAAAGAGAACAATGTAGCTAATGGGTTGAAACCAAAGGCTGCTGAATACTTCCCAACTTATGTACCTGTCCGATTTTCCATATGGCCATCACTGGAAGCTTCCTTTCAAGAAAGTAATGGAGTAGAGACATCTCATCATGAGGTTGTAAAGCCAATTCCAGTCGTTCCCAAGAATCCGGTCAATGTTGATGCACTTGTGGGAATGTCTAATCTGAGCATTGGAAACACACAGATGATTCTTGAAAGGGAGCCTTCCCCACTTTCCCTGAAATTGTTAGGAGAGCCATCGAGGCAGTCGGCATTCCATGCGAATACTCATGCGCCTGTTGGCCGGACGGACCTAAGCAGTGGCAAGAACAATCCAATCCAAGCTGTTTGA 1047 0.4976 MTRRCSHCSNNGHNSRTCPNRGGGGGGGGGVKLFGVRLTDGSIIKKSASMGNLMTLHHHCSSPSSSFVAAAGDNPGSPDPVGYLSDDPAHASSFANRRGERKKGVPWTEEEHRMFLVGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNATRRKRRSSLFDMAPDMPTDPPSVLEKQVLLLTSENSQSPNVKSQPSLNLSLKSEVDPMEIASEENVKENNVANGLKPKAAEYFPTYVPVRFSIWPSLEASFQESNGVETSHHEVVKPIPVVPKNPVNVDALVGMSNLSIGNTQMILEREPSPLSLKLLGEPSRQSAFHANTHAPVGRTDLSSGKNNPIQAV* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0187 348 SMART sant 103 153 IPR001005 -
Ahy18g0187 348 Gene3D - 107 156 - -
Ahy18g0187 348 MobiDBLite consensus disorder prediction 1 25 - -
Ahy18g0187 348 PANTHER TRANSCRIPTION FACTOR KUA1 1 342 - -
Ahy18g0187 348 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 102 154 IPR006447 GO:0003677
Ahy18g0187 348 PANTHER OS01G0187900 PROTEIN 1 342 - -
Ahy18g0187 348 MobiDBLite consensus disorder prediction 1 18 - -
Ahy18g0187 348 ProSiteProfiles Myb-like domain profile. 99 151 IPR001005 -
Ahy18g0187 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 99 155 IPR017930 -
Ahy18g0187 348 CDD SANT 106 151 IPR001005 -
Ahy18g0187 348 Pfam Myb-like DNA-binding domain 106 151 IPR001005 -
Ahy18g0187 348 MobiDBLite consensus disorder prediction 329 348 - -
Ahy18g0187 348 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Ahy18g0187 348 SUPERFAMILY Homeodomain-like 101 156 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0187 Ahy-Chr18 1450480 1453354 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy18g0187 Myb_DNA-binding 1.20E-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0187 - - gmx:778036 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0187 18 1450480 1453354 Ahy18g0187 18 1450480 1453354 ECH