Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0161 ATGTCTACACCTTTGGAACATGATTACATAGGCTTAGCAGAGAAGAAGAAGATACCTTCATCATCATCTTCTTCTTCTTCTTCTGAAGATGGAAAGACCTTCAAGGAGACTGAGTTAAGGCTTGGCCTACCAGGTTCTGAGTCTCCAGAGAGAAAACCACTTTCTGGGGTGTCTCTCTCTCTATTTGGGAAGCTCAATAACAACAACAATGTGATGAACCACCATGTCCATGTGGCTGGTGCTAAGAGAGGCTTTTCTGATGCCATTGATGCTAAATGGGGTTTCTCTGATGCTCATGGATCTGACTCTGACTTGGGAAAAGCTTCTGCTTTGTTTTCACCAAGAGGAGCAGGGAATGTTGTTGGAAAGCCTCCATTGGACCCCAAAACCATTAGCACCCAGCAAGGAAATACCATTAACACCCCTGCTTCTGCTTCACAAGCCATCAAAGAGTCCAAGCCTCTTCAGGAAAAGAACCCTCAACTTCCTGCTACTAATGAACATGCTAGTGCTCCTGCTTCTAAGGCACAGGTTGTGGGGTGGCCACCAATTCGATCGTTTCGAAAGAACACCATGGCCTCTAATTTGACAAAGAACAATGATGAAGCTGAAGGGAAACCAGGATTTGGTTGTTTGTATGTGAAGGTAAGCATGGATGGTGCTCCTTATCTAAGAAAGGTTGATCTCAAAACCTATAGCAACTATAAGGAACTTTCTTCAGCTCTTGAGAAGATGTTCAGCTGCTTCACCATTGGTCAGTGCAACTCTCCTGGGCTGCCTGGAAAAGATGGATTAAGTGAGAGCTCTTTGAGGGATCTTCTCCATGGCTCTGAATATGTTCTTACTTATGAAGACAAGGATGGAGATTGGATGCTTGTGGGAGATGTTCCTTGGGAGATGTTCACTGACTCGTGCAGGAGACTGAGGATCATGAAAGGGTCTGAGGCAATTGGACTAGCTCCAAGAGCAGTGGAAAAATCAAAGAGCCAAAACTAG 996 0.4488 MSTPLEHDYIGLAEKKKIPSSSSSSSSSEDGKTFKETELRLGLPGSESPERKPLSGVSLSLFGKLNNNNNVMNHHVHVAGAKRGFSDAIDAKWGFSDAHGSDSDLGKASALFSPRGAGNVVGKPPLDPKTISTQQGNTINTPASASQAIKESKPLQEKNPQLPATNEHASAPASKAQVVGWPPIRSFRKNTMASNLTKNNDEAEGKPGFGCLYVKVSMDGAPYLRKVDLKTYSNYKELSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRAVEKSKSQN* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0161 331 MobiDBLite consensus disorder prediction 116 176 - -
Ahy18g0161 331 MobiDBLite consensus disorder prediction 128 172 - -
Ahy18g0161 331 SUPERFAMILY CAD & PB1 domains 211 312 - -
Ahy18g0161 331 MobiDBLite consensus disorder prediction 1 53 - -
Ahy18g0161 331 Gene3D - 208 325 - -
Ahy18g0161 331 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 5 323 IPR003311 GO:0005634|GO:0006355
Ahy18g0161 331 ProSiteProfiles PB1 domain profile. 211 313 IPR000270 GO:0005515
Ahy18g0161 331 PANTHER AUXIN-RESPONSIVE PROTEIN 5 323 - -
Ahy18g0161 331 Pfam AUX/IAA family 36 322 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0161 Ahy-Chr18 1179852 1182163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0161 213 316 B3 DNA Binding Superfamily AT1G19850 33.962 2.26e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Ahy18g0161 AUX_IAA 1.00E-92 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0161 K14484 - gmx:100806699 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0161 18 1179852 1182163 Ahy18g0161 18 1179852 1182163 ECH