Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0159 ATGATGGGTGGGAACCCTAACCCTAACTGGTGGAATAATATCCCTCAACATCATCATCATCAGTATGAAGATGACTATTCACACATCAACATGATGAACATGCTAGATTTCACTTATAGCAAGAAGCTACCACCATCACCACCAGCATTATCCTACAAGTGTAATAGTAGTAGAATTAGCACTAACAAGAACAAGAACAAGAAAGGTAGGGTTTCAAGCCAACAACATCTCATCAAGGTGAGAAAGGAGAAGCTTGGTGATAGAATCACATCCCTTCATCAACTTGTTTCTCCATTTGGAAAGACTGACACAGCTTCCGTTCTATTGGAAGCAATTGGATATATAGGATTCCTTCACTCTCAAATTCAGACACTGACCTCTCCTTATTTGGACAACACCAATAATCCAAACTCTGTAACTGATGGAGAAGATAGTAAGAATAAGGAAAAGGACTTAAAGAGTAGAGGCTTGTGCTTGGTTCCAATATCATGCACCCAACATGTTGGAACTCAAGATTATCATCATGCTGCCGATTACTGGCCATCACCATTTGCCACCGGATTTTAA 567 0.4004 MMGGNPNPNWWNNIPQHHHHQYEDDYSHINMMNMLDFTYSKKLPPSPPALSYKCNSSRISTNKNKNKKGRVSSQQHLIKVRKEKLGDRITSLHQLVSPFGKTDTASVLLEAIGYIGFLHSQIQTLTSPYLDNTNNPNSVTDGEDSKNKEKDLKSRGLCLVPISCTQHVGTQDYHHAADYWPSPFATGF* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0159 188 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 69 118 IPR011598 GO:0046983
Ahy18g0159 188 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 33 173 - -
Ahy18g0159 188 CDD bHLH_AtbHLH_like 79 125 IPR045239 -
Ahy18g0159 188 Gene3D - 62 136 IPR036638 GO:0046983
Ahy18g0159 188 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 68 129 IPR036638 GO:0046983
Ahy18g0159 188 MobiDBLite consensus disorder prediction 128 148 - -
Ahy18g0159 188 PANTHER TRANSCRIPTION FACTOR BHLH68 33 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0159 Ahy-Chr18 1156519 1157793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0159 63 187 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 49.635 1.42e-33 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0159 - - ahf:112703662 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0159 18 1156519 1157793 Ahy18g0159 18 1156519 1157793 ECH