Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0154 ATGATAGAACCATTTTTGCTCCTTAAAAAACATACCCATTCCTCACCACACCATCCAACAACAACAACAACCACCTTCTCAATGGCCGCGGACATGTCCAACACCAACACCAACACCAACAACAACAACAACAACCACCCTTCTCACGCCAAGGATTTCTTCGCTTCCCCAGCTCTCTCCCTTAGCCTTGCTGGCATATTTCGGCATGCTGGGGTGGCGGCGGCGGAGGGCGAGGCTGCAACCTCCAACATGGAAGTGGAGGACGGCGATGAAGGCAGCGGCGGAGGAGGAGGCGCCGGTCACACGGTGGATATCAGCAGCGAGAACTCCGGCCCCACTAGATCGAGATCAGAGGATGACTACTTTGAAGGAGAAGGTGAGCATGAAGATGAAGATATTCTCGGTGATGATAACAATAACAATAACAATAACAAGAACAAGAACAAGAAGAAGAGGAAGAAATATCACAGGCACACCGCTGAGCAGATCAGAGAAATGGAAGCGCTATTCAAAGAGTCGCCACATCCTGATGAAAAGCAGAGGCAACAACTTAGCAAGCAGCTAGGCCTTGCTCCAAGACAAGTCAAGTTTTGGTTCCAAAATCGCAGAACCCAAATCAAGGCAATACAAGAGCGACATGAAAACTCATTGTTGAAGACGGAAATAGAGAAACTAAAGGAGAAAAACAAAGGGTTGAGAGAGACCATAAACAAAGCTTGTTGCCCCAACTGTGGTGTTGCAACCACTAGTACCAGAGACGGTGCCATTCCAACTGAAGAACAACAGCTTCGCATTGAGAATGCCAAACTCAAAGCTGAGATCGAGAAGCTTCGAGGAGCTTTAGGAAAATACGGTGGATCAGGTGGTGGTGGATCAACGTCTCCTTCATGTTCTTCTGGTGCTGCTGGTGGACATGAGCAAGAGAATAGAAGCTCGTTGGACTTTTACACTGGAATCTTCGGAGTTGACAAGTCAAGGATAATGGATACAGTGAACAAGGCTATGGAGGAGCTCATAACCATGGCAACAATGGGGGAACCCTTGTGGCTTCGTAGTGTTGAGACTGGCCGTGAGATACTCAACTACGATGAGTACATCAAACACTTCTCATCCCTTCAAAATTCTTCATCAAACAACACTAACACTACTCCTTCATCATCAAAGAGATCCATTATTGAAGCTTCAAGAGACACTGCCCTTGTCTTTGTTGATCTCCCACGCCTTCTCCAAACTTTCTTAGATGCGAATCAGTGGAAGGAAATGTTTCCATGTTTAGTATCTAAGGCGGCGACTGTGGATGTTATATGCAACGGAGAAGGTTCTAACAGGAATGGTGCAGTGCAACTGATGTTTGCTGAGGTGCAAATGCTAACACCAATGGTGCCCACAAGAGAAGTATATTTTGTCCGCTACTCAAAGCAGTTGAGTTCTGAACAATGGGCTATCATTGATGTATCCATTGACAAAGTAGAAGACAACATTGATGCCTCTCTCGTGAAATGTAGAAAACGCCCATCAGGTTGCATTATTGAGGACAAGTCAAATGGTCATTGCAAGGTGACATGGGTGGAGCACTTGGAATGCCAAAAGAGTCCAGTGCATACAATGTATAGGACTATTGTGAACAGTGGCATGGCCTTTGGCGCAAGGCACTGGATTTCCACTCTCCAACTTCAGTGCGAGCGTCTTGTTTTCTTCATGGCAACCAATGTTCCCATGAAGGATTCAACCGGTGTTGCTACATTGGCTGGGAGGAAAAGCATTCTGAAGTTGGCACAAAGAATGACATGGGGTTTCTGCCATGCAGTTGGTGCATCAAGCTTCCACACATGGACCAAGGTTACAAGTAAAACTGGGGAAGATATTAGGATCAGTTCACGGAAGAACTTGAACGATCCTGGTGAACCTCTTGGACTCATACTCTGCGCTGTTTCTTCTGTGTGGTTACCTGTCTCTCCTAACGTCTTGTTTGATTTCTTGAGGGATGAAACTCGCCGCACTGAGTGGGATATAATGTCCAGTGGTGGCTCAGTTCAGTCCATTGCAAATTTGGCCAAAGGACAAGACCGCGGCAATGCGGTAACCATCCAAACAATAAAATCGAAGGGTTAA 2112 0.4635 MIEPFLLLKKHTHSSPHHPTTTTTTFSMAADMSNTNTNTNNNNNNHPSHAKDFFASPALSLSLAGIFRHAGVAAAEGEAATSNMEVEDGDEGSGGGGGAGHTVDISSENSGPTRSRSEDDYFEGEGEHEDEDILGDDNNNNNNNKNKNKKKRKKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKTEIEKLKEKNKGLRETINKACCPNCGVATTSTRDGAIPTEEQQLRIENAKLKAEIEKLRGALGKYGGSGGGGSTSPSCSSGAAGGHEQENRSSLDFYTGIFGVDKSRIMDTVNKAMEELITMATMGEPLWLRSVETGREILNYDEYIKHFSSLQNSSSNNTNTTPSSSKRSIIEASRDTALVFVDLPRLLQTFLDANQWKEMFPCLVSKAATVDVICNGEGSNRNGAVQLMFAEVQMLTPMVPTREVYFVRYSKQLSSEQWAIIDVSIDKVEDNIDASLVKCRKRPSGCIIEDKSNGHCKVTWVEHLECQKSPVHTMYRTIVNSGMAFGARHWISTLQLQCERLVFFMATNVPMKDSTGVATLAGRKSILKLAQRMTWGFCHAVGASSFHTWTKVTSKTGEDIRISSRKNLNDPGEPLGLILCAVSSVWLPVSPNVLFDFLRDETRRTEWDIMSSGGSVQSIANLAKGQDRGNAVTIQTIKSKG* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0154 703 Gene3D - 387 561 IPR023393 -
Ahy18g0154 703 Pfam START domain 332 562 IPR002913 GO:0008289
Ahy18g0154 703 Gene3D - 137 222 - -
Ahy18g0154 703 MobiDBLite consensus disorder prediction 78 159 - -
Ahy18g0154 703 ProSiteProfiles START domain profile. 320 565 IPR002913 GO:0008289
Ahy18g0154 703 CDD homeodomain 156 207 IPR001356 GO:0003677
Ahy18g0154 703 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 53 701 IPR042160 -
Ahy18g0154 703 Pfam Homeodomain 152 207 IPR001356 GO:0003677
Ahy18g0154 703 SMART START_1 329 562 IPR002913 GO:0008289
Ahy18g0154 703 SUPERFAMILY Homeodomain-like 139 210 IPR009057 -
Ahy18g0154 703 MobiDBLite consensus disorder prediction 32 51 - -
Ahy18g0154 703 CDD START_ArGLABRA2_like 324 561 - -
Ahy18g0154 703 SMART HOX_1 151 213 IPR001356 GO:0003677
Ahy18g0154 703 Coils Coil 260 280 - -
Ahy18g0154 703 SUPERFAMILY Bet v1-like 584 698 - -
Ahy18g0154 703 MobiDBLite consensus disorder prediction 284 308 - -
Ahy18g0154 703 MobiDBLite consensus disorder prediction 289 308 - -
Ahy18g0154 703 MobiDBLite consensus disorder prediction 32 50 - -
Ahy18g0154 703 ProSitePatterns 'Homeobox' domain signature. 184 207 IPR017970 GO:0000981|GO:0006355
Ahy18g0154 703 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 53 701 - -
Ahy18g0154 703 ProSiteProfiles 'Homeobox' domain profile. 149 209 IPR001356 GO:0003677
Ahy18g0154 703 SUPERFAMILY Bet v1-like 322 562 - -
Ahy18g0154 703 Coils Coil 208 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0154 Ahy-Chr18 1098857 1117703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0154 105 702 Homeobox Transcription Factor Family AT1G79840 62.748 0.0 753
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Ahy18g0154 START 1.40E-52 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0154 K09338 - gmx:100809926 1043.88