Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy18g0132 | ATGAGCGTGGTTGGTTTTGATTTTGGTAATGAGAGCTGCATTGTTGCTGTTGCAAGGCAGAGGGGGATTGATGTTGTGCTCAATGATGAGTCCAAGCGTGAAACTCCTGCAGTTGTATGCTTTGGTGACAAACAACGGTTCATTGGGACAGCTGGGGCTGCATCTACGATGATGAACCCTAAGAATTCAATCTCACAGATAAAGCGGTTAATAGGCAGACAATTCTCGGATCCTGAACTGCAACGAGATCTGAAGTCATTGCCCTTCACAGTTACTGAAGGGCCTGATGGGTTTCCATTAATCCATGCACGATACTTGGGTGAATCTAAGGCATTTACGCCTACCCAAGTCATGGCAATGGTGTTGTCAAATCTTAAAGAGATTGCCGAGAAAAACCTAAATGCAGCTGTAGTTGATTGTTGCATTGGTATTCCAGTTTATTTTACTGATCTTCAAAGGAGGGCAGTCATGGATGCTGCTACTATTGCTGGTTTGCATCCACTTCGTCTGCTTCATGAAACAACAGCAACTGCTTTGGCCTATGGAATTTACAAAACAGATCTTCCTGAAAATGATACACTGAATGTTGCATTTGTTGATGTTGGGCATGCTAGCATGCAAGTCTGCATTGCTGGTTTTAAAAAAGGGCAGCTGAAAGTGTTGGCTCATTCATATGACAGGTCTTTAGGGGGTAGGGATTTTGACGAAGTTCTCTTCCATCACTTTGCTGCCAAATTTAAAGAGGAATATAAAATTGATGTTTTACAGAATGCAAGAGCTTCATTAAGGCTGAGGGCTGCATGTGAGAAGCTCAAGAAGGTACTTAGTGCAAATCCAGAAGCACCTCTGAATATCGAGTGCTTAATGGATGAGAAGGATGTCAGGGGCTTTATCAAACGTGAGGAGTTTGAGCAACTAAGTATTCCAATTTTGGAACGTGTGAAGAGACCTTTGGAGAAGGCACTTGCAGAAGCAGGACTTACAGTTGAGAATATACACATGGTCGAGATAGTTGGTTCCGGTTCTAGAGTACCAGCCATAAACAAAATCTTAACAGACTTTTTCAAAAAGGATCCTAGAAGGACAATGAATGCTAGTGAATGTGTAGCCAGGGGATGTGCATTGCAGTGTGCAATTCTTAGTCCAACATTTAAAGTAAGAGAGTTCCAGGTCAATGAAAGCTTTCCTTTCTCAATCTCTCTTTCGTGGAAAGGTTCTGGTCCAGATGCACAAGATAGTGGACCAGATAGTAAGCAAAGCACTATTGTTTTCCCCAAGGGAAATCCTATACCAAGTATCAAGGCTTTGACATTTTATAGGCCAGGGACCTTTACTGTTGAAGTACAATATGACGATGTCAGTGAGTTGCAAATACCTGCTAAGATCAGCACATATACTATTGGCCCATTTCAATCTACCAAAGTTGAAAAGGCTAAAATTAAAGTTAGAGTGCGACTGAATCTACATGGAATTGTATCTGTTGAGTCTGCAACTCTCATTGAGGAGGAAGAGATTGAGATTCCAGTTTCCAAAGAATCAGCTGGAGAAGATACCAAGATGGAAACTGATGAAGCTGCTGCTGCTGAGGCTCCTGCACCTCCTAGCTCGACTGATAATGATGTTAATATGCAAGATGCCAAGGCAACAACAGATGCCAATGCAACCACAGGTGCTGATGCCGCAGGTGAAAATGGTGTTCCGGAGGCAGGAGACAAGCCTGTTCAGATGGAGACTGATAACAAGGTTGAGGCTCCAAAGAAGAAAGTAAAGAAAACTACCATTCCCGTGGCAGAGGTGGTTTATGGAGCACTGGCACCTGTGGATGTCCAGAAGGCTGTAGAGAAGGAGTTTGAAATGGCTTTGCAAGATCGAGTGATGGAGGAAACAAAGGACAAGAAAAATGCTGTGGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACAAATACCAAGAGTTTGTCACCGACTCGGAGAAGGAAGCTTTTACTGCTAAACTTCAGGAGGTGGAAGATTGGTTATACGAGGATGGTGAAGATGAAACCAAAGGTGTATACATTGCCAAACTCGATGAACTTAAGAAGCAAGGAGATCCGGTTGAAGAACGATACAGAGAATACACGGAGAGGGGTGCAGTAATTGATCAACTCATCTACTGTATAAATAGTTACAGAGAAGCTGCAATGTCAAGTGATCCCAAGTTTGATCACATCGAACTTGAGGAGAAACAGAAGGTCCTAAATGAATGTGTAGAGGCTGAGAACTGGCTTCGGGAGAAGCAGCAGCAGCAGGACATTCTTCCAAAATATGCAACCCCTGTGCTGCTGTCAGCTGAAATAAGAAAGAAAGCTGAGGCCGTTGATAGGTTCTGTAAGCCAATAATGACTAAACCCAGACCGGCAAAGCCAGCAACACCAGAAGCACCAGCAACTCCCCCACCTCAGGGTGGCGAACAGCAGCAACCACCGGAGAATGCCAATGCCAATGCCAATGCCAGTCCTAATCAGAATGCAGGGGACAGTGGGAACAATCAGGCCCCGCCGGAGGCCGGAGAACCAATGGAGACTGATAAATCGGAGAACACGAGCTCTGCGTAA | 2598 | 0.4411 | MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAVVCFGDKQRFIGTAGAASTMMNPKNSISQIKRLIGRQFSDPELQRDLKSLPFTVTEGPDGFPLIHARYLGESKAFTPTQVMAMVLSNLKEIAEKNLNAAVVDCCIGIPVYFTDLQRRAVMDAATIAGLHPLRLLHETTATALAYGIYKTDLPENDTLNVAFVDVGHASMQVCIAGFKKGQLKVLAHSYDRSLGGRDFDEVLFHHFAAKFKEEYKIDVLQNARASLRLRAACEKLKKVLSANPEAPLNIECLMDEKDVRGFIKREEFEQLSIPILERVKRPLEKALAEAGLTVENIHMVEIVGSGSRVPAINKILTDFFKKDPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSGPDAQDSGPDSKQSTIVFPKGNPIPSIKALTFYRPGTFTVEVQYDDVSELQIPAKISTYTIGPFQSTKVEKAKIKVRVRLNLHGIVSVESATLIEEEEIEIPVSKESAGEDTKMETDEAAAAEAPAPPSSTDNDVNMQDAKATTDANATTGADAAGENGVPEAGDKPVQMETDNKVEAPKKKVKKTTIPVAEVVYGALAPVDVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYQEFVTDSEKEAFTAKLQEVEDWLYEDGEDETKGVYIAKLDELKKQGDPVEERYREYTERGAVIDQLIYCINSYREAAMSSDPKFDHIELEEKQKVLNECVEAENWLREKQQQQDILPKYATPVLLSAEIRKKAEAVDRFCKPIMTKPRPAKPATPEAPATPPPQGGEQQQPPENANANANASPNQNAGDSGNNQAPPEAGEPMETDKSENTSSA* | 866 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy18g0132 | 865 | MobiDBLite | consensus disorder prediction | 508 | 584 | - | - | |
Ahy18g0132 | 865 | MobiDBLite | consensus disorder prediction | 799 | 819 | - | - | |
Ahy18g0132 | 865 | CDD | HSPA4_like_NDB | 2 | 381 | - | - | |
Ahy18g0132 | 865 | MobiDBLite | consensus disorder prediction | 820 | 844 | - | - | |
Ahy18g0132 | 865 | Gene3D | - | 606 | 711 | IPR029048 | - | |
Ahy18g0132 | 865 | MobiDBLite | consensus disorder prediction | 535 | 557 | - | - | |
Ahy18g0132 | 865 | Gene3D | Actin; Chain A, domain 4 | 230 | 313 | - | - | |
Ahy18g0132 | 865 | PRINTS | 70kDa heat shock protein signature | 140 | 160 | - | - | |
Ahy18g0132 | 865 | PRINTS | 70kDa heat shock protein signature | 332 | 348 | - | - | |
Ahy18g0132 | 865 | PRINTS | 70kDa heat shock protein signature | 477 | 493 | - | - | |
Ahy18g0132 | 865 | PRINTS | 70kDa heat shock protein signature | 2 | 15 | - | - | |
Ahy18g0132 | 865 | PRINTS | 70kDa heat shock protein signature | 30 | 42 | - | - | |
Ahy18g0132 | 865 | PRINTS | 70kDa heat shock protein signature | 363 | 383 | - | - | |
Ahy18g0132 | 865 | Gene3D | - | 712 | 798 | IPR029048 | - | |
Ahy18g0132 | 865 | MobiDBLite | consensus disorder prediction | 789 | 865 | - | - | |
Ahy18g0132 | 865 | SUPERFAMILY | Actin-like ATPase domain | 195 | 380 | IPR043129 | - | |
Ahy18g0132 | 865 | Gene3D | - | 5 | 374 | - | - | |
Ahy18g0132 | 865 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 604 | 704 | IPR029048 | - | |
Ahy18g0132 | 865 | SUPERFAMILY | Actin-like ATPase domain | 1 | 185 | IPR043129 | - | |
Ahy18g0132 | 865 | MobiDBLite | consensus disorder prediction | 508 | 524 | - | - | |
Ahy18g0132 | 865 | Pfam | Hsp70 protein | 3 | 705 | IPR013126 | GO:0005524|GO:0140662 | |
Ahy18g0132 | 865 | Gene3D | - | 38 | 113 | - | - | |
Ahy18g0132 | 865 | PANTHER | HEAT SHOCK 70 KDA PROTEIN 14 | 1 | 864 | - | - | |
Ahy18g0132 | 865 | Gene3D | - | 186 | 360 | - | - | |
Ahy18g0132 | 865 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 384 | 637 | IPR029047 | - | |
Ahy18g0132 | 865 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 717 | 802 | IPR029048 | - | |
Ahy18g0132 | 865 | PANTHER | HSC70CB, ISOFORM G-RELATED | 1 | 864 | - | - | |
Ahy18g0132 | 865 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 387 | 602 | IPR029047 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy18g0132 | Ahy-Chr18 | 948672 | 953653 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy18g0132 | 4 | 438 | Calmodulin-binding Proteins | AT1G16030 | 35.616 | 7.00e-88 | 291 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy18g0132 | K09489 | - | gmx:100778196 | 1397.88 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy18g0132 | 18 | 948672 | 953653 | Ahy18g0132 | 18 | 948672 | 953653 | ECH | |
Ahy18g0132 | 18 | 948672 | 953653 | Ahy7g2178 | 7 | 80165836 | 80170818 | hybridization | |
Ahy18g0132 | 18 | 948672 | 953653 | Ahy9g0192 | 9 | 2041471 | 2047141 | PCT | |
Ahy9g0192 | 9 | 2041471 | 2047141 | Ahy18g0132 | 18 | 948672 | 953653 | PCT |