Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0070 ATGCCACTTCCACATTTGAACCTCATCACTACTTCTTCACTACTATCTCTCTCTCTCTCTCTCTCTGATATGGTGCAGTCAAAGAAATTCAGAGGTGTCAGGCAACGCCATTGGGGCTCTTGGGTTTCTGAGATTCGCCACCCATTATTGAAAAGGAGGGTGTGGCTTGGAACATTTGAAACTGCTGAAGAAGCAGCAAGAGCATACGATGAAGCAGCTATTTTGATGAGTGGAAGGAACGCCAAGACTAACTTCCCAGTTTCAGAGAACAATAACAATAACAACAACAGTTCCAGTGGCACTGCTTCTTCTTCATCTTCATCTTCCACAACAACATTCTCTGCAGTTCTTAGTGCAAAGCTGAGGAAGTGTTGCAAGTCGCCATCACCTTCTCTCACCTGCCTCAGGCTCGACACAGAGAATTGCCACATTGGTGTGTGGCAGAAGCGGGCCGGGCCTCGCTCCGAATCCAACTGGATCATGATGGTCGAGTTGGAAAGGAACAACACCACCACCCCCCTCACCACCCAACCTGCTTCTTCTTCCTTGAAGCCAGAGGAAGCCACCAATAATAACGGTGGCTTGGATGAGGAACAGAGGATTGCCCTGCAGATGATAGAAGAGCTTCTCAATAGGAATTAA 642 0.4782 MPLPHLNLITTSSLLSLSLSLSDMVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAILMSGRNAKTNFPVSENNNNNNNSSSGTASSSSSSSTTTFSAVLSAKLRKCCKSPSPSLTCLRLDTENCHIGVWQKRAGPRSESNWIMMVELERNNTTTPLTTQPASSSLKPEEATNNNGGLDEEQRIALQMIEELLNRN* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0070 213 MobiDBLite consensus disorder prediction 85 109 - -
Ahy18g0070 213 Pfam AP2 domain 29 77 IPR001471 GO:0003700|GO:0006355
Ahy18g0070 213 Gene3D AP2/ERF domain 28 88 IPR036955 GO:0003700|GO:0006355
Ahy18g0070 213 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 24 213 - -
Ahy18g0070 213 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Ahy18g0070 213 SUPERFAMILY DNA-binding domain 29 88 IPR016177 GO:0003677
Ahy18g0070 213 PANTHER AP2-EREBP TRANSCRIPTION FACTOR 24 213 - -
Ahy18g0070 213 CDD AP2 28 87 IPR001471 GO:0003700|GO:0006355
Ahy18g0070 213 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Ahy18g0070 213 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Ahy18g0070 213 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Ahy18g0070 213 MobiDBLite consensus disorder prediction 170 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0070 Ahy-Chr18 488760 489695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0070 24 213 AP2-EREBP Transcription Factor Family AT1G15360 63.682 7.65e-82 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy18g0070 AP2 9.60E-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0070 - - gmx:100796962 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0070 18 488760 489695 Ahy18g0070 18 488760 489695 ECH