Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0036 ATGGATGATCAAGTGAATGAATGCCTTTGCCGCACCAACAACTTTGATGAAGATTACCTCCTGAGAGATATCCTCCAGCAGCCGCAACAAAGAAGCCAGACGGCCATCGGAAATAGGGCAACAAGTTCTTATATACTGTCTTTCGATAAATCGGCAAGTAAGAGGAGAAGAAGCGCTTCAGAGACGGCGGATCACATAATGTCAGAGAGGAACAGGAGACAGGAACTCTCTAGAAAGTTCATTGCACTTTCCGCAACTATACCTGGCTTGAAGAAGGCGCACGTACTTGAAGAAGCCATAAAGTATGTGAAAGAACTAGAAGAGCGTGTGAAGGTGCTGGAAGAAGATGGCGAGATAAGCATAACGAGATCTCATGTGTGCGGGTGCGGCCACGAGACACTTCCAGAAGTTGAAGCAAGAGTATTTGGGAAGCAAGTGCTCATCAAAATTCACTGTGTCACTCAATGCGGCGTTCTCATCCAAATATTCTCCCAACTTCAACTCCTTCATCTTTCCATTTCCAGCAGTAACGTCTTACCATTTGGGAACACTCTTGACATCACCATTATTGCTCACGTACGTAAATCCACAATTCTATATTCTCTTCTCTTCATTACTCACATTCACAACTACTCCATCGTTCTACAGATGGTCACAAATGCAGCTATCAAATAG 675 0.4415 MDDQVNECLCRTNNFDEDYLLRDILQQPQQRSQTAIGNRATSSYILSFDKSASKRRRSASETADHIMSERNRRQELSRKFIALSATIPGLKKAHVLEEAIKYVKELEERVKVLEEDGEISITRSHVCGCGHETLPEVEARVFGKQVLIKIHCVTQCGVLIQIFSQLQLLHLSISSSNVLPFGNTLDITIIAHVRKSTILYSLLFITHIHNYSIVLQMVTNAAIK* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0036 224 SMART finulus 66 112 IPR011598 GO:0046983
Ahy18g0036 224 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 49 194 - -
Ahy18g0036 224 PANTHER BHLH TRANSCRIPTION FACTOR 49 194 - -
Ahy18g0036 224 Coils Coil 96 116 - -
Ahy18g0036 224 Gene3D - 48 120 IPR036638 GO:0046983
Ahy18g0036 224 Pfam Helix-loop-helix DNA-binding domain 64 107 IPR011598 GO:0046983
Ahy18g0036 224 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 62 126 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0036 Ahy-Chr18 273274 274797 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0036 45 191 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 42.529 4.48e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy18g0036 HLH 6.00E-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0036 - - aip:107614617 325.865