Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0035 ATGGAGCAGTGTTGGGAGAACTGGCCTCTACACACGGAAATAGAGCACCATGATCATGGAGATTTCTTCTTATCATTGGAGCAGTGCCAGAAGCCACCTGATGATGATGACGATTTCCTCAGAGAAATCCTGCAGATGCCACCGGATTTTATTGACAATCATTCTACTGTGGATCTCGTCACCACCGGCACGACGGAGAGCGCGGAGGGAAAAAGGCCCAGAACATTCATTCTCTCCTTCGATAACTCAACCATAATACCTGCCATGGCAGAGCAACAACAACCGCTGGGGGTGGGTGCGGGTGCTGCCACTACCACCCCTTTGCCCTCCTTATCAAAGAAACGGAACCTTCCTCAGAAGCCGCAGCAAGCAAGGATCCCCGTCCCCGTCCCTCACCCCCAGCCAGGAGCAGCAAAGAGGAGTCGAAACGACTCTCAGATTGTGGATCACATCATGGCTGAGAGAAAAAGAAGACAGCAACTCACCCAGATGTTCATAGCTCTCTCCGCCACTATTCCTGGCTTGAAGAAGACGGACAAGGCTTCTATACTTGGGGAAGCCATTAATTACGTGAAACAGCTGCAAGAACGTGTGAGGGAGCTGGAAAAGCGGAACAATGATAACAAGAGGGGCCCAACAGAGCCAGTAATATTCCTCAACAAGACTCAGCTGCTGTGTCGGAACAACGAAGACAGCACCAGCGAGGAAGAGGAGGAGGAGGATGAGGAGGAGGAGGAAGTGGAGGATTGGCGTAGCAAGGAGGAAAAACAAGTGCTGCCAGATGTTGAAGCAAGAATGCTGGAGAAGGAGAAGGAAGTGCTGATTGAGATCCACTGCGAGAAAGAGAATGGAATTGAGGTGAAGATATTGGAGCAGCTTGAAAATCTTCATCTGAGTGTGACCGGAAGCAGCGTTTTGCCATTTGGGAATTCGACTCTGGGTATTACCATCATTGCAAAGATGGGAGATGCTTACACCATGACACTCCATGATCTCCTCACAAATTTACGCCAACTGTTATTGATCAACAACACTACTGATCCGTACTAG 1050 0.4962 MEQCWENWPLHTEIEHHDHGDFFLSLEQCQKPPDDDDDFLREILQMPPDFIDNHSTVDLVTTGTTESAEGKRPRTFILSFDNSTIIPAMAEQQQPLGVGAGAATTTPLPSLSKKRNLPQKPQQARIPVPVPHPQPGAAKRSRNDSQIVDHIMAERKRRQQLTQMFIALSATIPGLKKTDKASILGEAINYVKQLQERVRELEKRNNDNKRGPTEPVIFLNKTQLLCRNNEDSTSEEEEEEDEEEEEVEDWRSKEEKQVLPDVEARMLEKEKEVLIEIHCEKENGIEVKILEQLENLHLSVTGSSVLPFGNSTLGITIIAKMGDAYTMTLHDLLTNLRQLLLINNTTDPY* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0035 349 MobiDBLite consensus disorder prediction 105 119 - -
Ahy18g0035 349 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 147 217 IPR036638 GO:0046983
Ahy18g0035 349 Gene3D - 137 210 IPR036638 GO:0046983
Ahy18g0035 349 MobiDBLite consensus disorder prediction 99 144 - -
Ahy18g0035 349 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 4 343 - -
Ahy18g0035 349 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 145 194 IPR011598 GO:0046983
Ahy18g0035 349 MobiDBLite consensus disorder prediction 232 249 - -
Ahy18g0035 349 Coils Coil 226 253 - -
Ahy18g0035 349 Pfam Helix-loop-helix DNA-binding domain 150 195 IPR011598 GO:0046983
Ahy18g0035 349 PANTHER BHLH TRANSCRIPTION FACTOR 4 343 - -
Ahy18g0035 349 SMART finulus 151 200 IPR011598 GO:0046983
Ahy18g0035 349 MobiDBLite consensus disorder prediction 227 255 - -
Ahy18g0035 349 Coils Coil 184 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0035 Ahy-Chr18 266313 268687 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0035 141 340 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 45.000 3.89e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy18g0035 HLH 5.30E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0035 - - adu:107459735 634.409