Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0034 ATGATGATGATGATGATGATGAGCAAGAGCAACAGTTCCAAGTCCATAGTCAATGGTGGTAATACGGCAAAGAAGGCAAGAAGAAGCTCTTCGGAGTGCTTAGACCACATCGTGGCGGAGAGGAAGAGGAGGCAAGAGATCACTCAGAGATTCATAGCACTTTCTGCCACCATCCCTCACTTGAAAAAGATTGACAAGGTGTCAATTCTTAGTGAAGCAATCGCTTATATCAAGCAACTCAAAGAGCAAGGGAAGAAGCTAGAGGAGGAAAGCAGAAAGAAGAACAGAACAGTAGTAGAGTCGGTGTCGTTGGTGAACAAGAGGCATGATGCTGCATGTGAACTAGTTGAAGCAAGGGCGTTGGAGAAGCAGGTGTTGATTCGGATCCACTGCCATGGCCACAAAGCCGTTCCCCAAGTATTCAGCCATCTCACAAATCTTGATCTCTCCATTGTAAGCACAAGTGTCTTACCCTTTGGGACCTGTGCCCTTGATATTACCATTGTTGCTCAGATGGGTGAGAAATACAGGGCAAGCATGAAGGATCTAGTTCAAAGCTTGAGACTGGCGATACCACTCTGTTAA 585 0.4598 MMMMMMMSKSNSSKSIVNGGNTAKKARRSSSECLDHIVAERKRRQEITQRFIALSATIPHLKKIDKVSILSEAIAYIKQLKEQGKKLEEESRKKNRTVVESVSLVNKRHDAACELVEARALEKQVLIRIHCHGHKAVPQVFSHLTNLDLSIVSTSVLPFGTCALDITIVAQMGEKYRASMKDLVQSLRLAIPLC* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0034 194 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 31 80 IPR011598 GO:0046983
Ahy18g0034 194 SMART finulus 37 86 IPR011598 GO:0046983
Ahy18g0034 194 Coils Coil 70 97 - -
Ahy18g0034 194 MobiDBLite consensus disorder prediction 1 31 - -
Ahy18g0034 194 PANTHER BHLH TRANSCRIPTION FACTOR 11 191 - -
Ahy18g0034 194 MobiDBLite consensus disorder prediction 1 27 - -
Ahy18g0034 194 Gene3D - 24 104 IPR036638 GO:0046983
Ahy18g0034 194 Pfam Helix-loop-helix DNA-binding domain 36 81 IPR011598 GO:0046983
Ahy18g0034 194 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 36 98 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0034 Ahy-Chr18 256074 257502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0034 19 191 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 36.788 8.65e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy18g0034 HLH 4.60E-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0034 - - ahf:112703796 352.058