Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0032 ATGGCCACTTTCCTTCCCAAACCAGCACCATCAGAATCACCCCAATGGCTCCTCCATGTTAACATGGATCCACAAAGCATAACCCGCTTCTTCTCGTCTGAACCTCAAAACCCTCCACAAACCAGAAATGATGAAAAAACACTCGAAGGAATCGCTGCTATTGTTGGAGAACACGTCCTCTTTGGGACAAAAAATGATAGTAACCCAACCCACCACAAAATGATGGAACATAACAAGACGGAGAATGGTCCGGTCATCACCAAGAGGTACAGAGGGGTCAGGAAAAGGCCCTGGGGAAGGTGGTCGGCCGAGATACGCGACCGTATTGGGAGGTGCCGCCACTGGCTTGGCACCTTCGACACCGCGGAGGAGGCGGCGCGTGCCTACGATGCGGCGGCTAGGCGCCTGAGAGGGTCCAAGGCTAGAACCAACTTCGAGATACCGTCGGTGTTGCCGGTTTCGGCGTCGTCGTCGTCGTCAAGCAGTGGCGGAATCCGCAAGAGGAAAGGGGCGCGCGGTGGCGATAGGAAGTGTTCGGTGGTTACCTCGGTTGCACAATTGTTCAGTTCTGGGGTGCCTGATGCGCTTGAGCTAAAGCTTGGTGTGAGACTGTGA 615 0.548 MATFLPKPAPSESPQWLLHVNMDPQSITRFFSSEPQNPPQTRNDEKTLEGIAAIVGEHVLFGTKNDSNPTHHKMMEHNKTENGPVITKRYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEIPSVLPVSASSSSSSSGGIRKRKGARGGDRKCSVVTSVAQLFSSGVPDALELKLGVRL* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0032 204 Pfam AP2 domain 89 138 IPR001471 GO:0003700|GO:0006355
Ahy18g0032 204 PRINTS Ethylene responsive element binding protein signature 90 101 IPR001471 GO:0003700|GO:0006355
Ahy18g0032 204 PRINTS Ethylene responsive element binding protein signature 112 128 IPR001471 GO:0003700|GO:0006355
Ahy18g0032 204 MobiDBLite consensus disorder prediction 152 173 - -
Ahy18g0032 204 CDD AP2 88 147 IPR001471 GO:0003700|GO:0006355
Ahy18g0032 204 SUPERFAMILY DNA-binding domain 89 146 IPR016177 GO:0003677
Ahy18g0032 204 ProSiteProfiles AP2/ERF domain profile. 89 146 IPR001471 GO:0003700|GO:0006355
Ahy18g0032 204 SMART rav1_2 89 152 IPR001471 GO:0003700|GO:0006355
Ahy18g0032 204 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF084 39 192 - -
Ahy18g0032 204 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 39 192 - -
Ahy18g0032 204 Gene3D AP2/ERF domain 88 147 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0032 Ahy-Chr18 247097 248040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0032 17 152 AP2-EREBP Transcription Factor Family AT1G80580 56.250 1.13e-32 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy18g0032 AP2 2.00E-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0032 - - twl:120007361 181.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0032 18 247097 248040 Ahy18g0032 18 247097 248040 ECH