Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0029 ATGAGCCTCCTTGTTCTGTTTCTTCATGCTGCTCTTGCTCACACTTCTGCAAATGCACAACCTCCAGGAGTTAAGGTTAGAATGGTGCACCACCAGAATTTGAATAAGAGGATTCAAATATCACTAATTGTTTGTTCTGCGCTTCTCCTTGGAATCTTCCTACTTGTATTGTATGTCTGGTTTCGTCGCCATAGAAGCTTAACAAGCTCCAGCAGTAAAAGCCAAGGAAACATGGAGGCTGAAAAAGGGGAAACCTTAAACCCTGTCAATGCTAAACTTAACTACTCAAGGATGGCAGATAAGAAGAGTTCAGTTGCTATTTTTGACTTTCAATTATTAGAGGCCGCAACAAACAGCTTTAGCAACAGCAATGTTATGGCAGAGAGTGGTTCTAGAATTGTTTACAGAGCTCATCTTGATGAGAATTTCCATGCAGCTGTTAAGAAAGCAGATAGTGATGCTGATAGAGAATTTGAGAATGAAGTGAGTTGGTTGAGCAAGATTCGGCATCAAAATATCATAAAACTCATGGGCTATTGTATTCATGGTGAATCAAGATTTCTTGTTTATGAATTGATGGAGAATGGATCATTGGAAACTCAATTGCATGGGCCTAATCGTGGATCATCTTTAACTTGGTATCTCCGTTTAAGAATTGCAGTTGATGTTGCCAGAGCATTAGAATATCTTCACGAACACTCCAATCCCCCTGTGGTTCATAGAGATATAAAGTCTTCCAATGTTCTTCTCGATTCTAATTTTAATGCTAAGCTCACAGATTTTGGACTTGCTATCTCTTCTGGAGTGCAACACAAGAACATGAAGATGTCGGGAACTTTGGGATATGTGGCACCTGAGTACATATCACATGGTAAACTAACTGATAAGAGCGATGTGTATGCTTTTGGGGTTGTCCTTTTAGAACTTCTGACTGGAAAAAAACCGATGGAAAACATGTCAGCAGACCAATATCAATCCCTCGTTTCGTGGGCCATGCCTCAGCTAACCGACAGATTGAAGCTTCCAAGTATTGTGGATCCTGTTATCAAAGACACAATGGATTTGAAACATTTATATCAGGTTGCAGCAGTAGCTGTTCTGTGTGTGCAAGCCGAACCAAGTTATAGGCCGCTAATAACAGATGTGCTACATTCCCTCATCCCTTTGGTACACAACCAACTTAAGGTTGGTGCCTCTCTCACAGATATAGAACCAGTCCGCTCAGAGTGA 1230 0.4089 MSLLVLFLHAALAHTSANAQPPGVKVRMVHHQNLNKRIQISLIVCSALLLGIFLLVLYVWFRRHRSLTSSSSKSQGNMEAEKGETLNPVNAKLNYSRMADKKSSVAIFDFQLLEAATNSFSNSNVMAESGSRIVYRAHLDENFHAAVKKADSDADREFENEVSWLSKIRHQNIIKLMGYCIHGESRFLVYELMENGSLETQLHGPNRGSSLTWYLRLRIAVDVARALEYLHEHSNPPVVHRDIKSSNVLLDSNFNAKLTDFGLAISSGVQHKNMKMSGTLGYVAPEYISHGKLTDKSDVYAFGVVLLELLTGKKPMENMSADQYQSLVSWAMPQLTDRLKLPSIVDPVIKDTMDLKHLYQVAAVAVLCVQAEPSYRPLITDVLHSLIPLVHNQLKVGASLTDIEPVRSE* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0029 409 SUPERFAMILY Protein kinase-like (PK-like) 97 386 IPR011009 -
Ahy18g0029 409 PANTHER RECEPTOR-LIKE KINASE 17 393 - -
Ahy18g0029 409 PANTHER OS01G0253100 PROTEIN 17 393 IPR045271 GO:0004714|GO:0006468
Ahy18g0029 409 CDD STKc_IRAK 126 389 - -
Ahy18g0029 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Ahy18g0029 409 ProSiteProfiles Protein kinase domain profile. 120 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g0029 409 SMART serkin_6 120 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g0029 409 Pfam Protein tyrosine and serine/threonine kinase 136 343 IPR001245 GO:0004672|GO:0006468
Ahy18g0029 409 Gene3D Phosphorylase Kinase; domain 1 82 192 - -
Ahy18g0029 409 Gene3D Transferase(Phosphotransferase) domain 1 193 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0029 Ahy-Chr18 230895 233984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0029 13 332 Receptor kinase-like Gene Family AT1G80640 48.000 5.44e-103 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Ahy18g0029 PK_Tyr_Ser-Thr 2.40E-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0029 - - gmx:100811491 632.098