Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0003 ATGGCCCGCTCTACCTCGCGGGGTTCCAACTCCTCTCCCAATGGCCTCCTCACAGTTACCATCGCTGGCGGCCGCCATGACCACGTGGACCCCGCTTCGAACAACGAAGAAGAAGAAGACGATGAACTAGTGGATCCCGATGATCCTTTTGACGTTATCCACACCAAGAACGTCCCGCTCCAGACGCTCAAGCGTTGGAGACAAGCAGCATTGGTTCTGAATGCCTCCAGGCGTTTTAGATATACTTTGGACTTGAAAAAGGAAGAGGAGAAAGAGCAAAAGAAAAGCATGATTAGAGCCCATGCACAAGTCATAAGAGCAGCTTTGCTTTTCAGATTGGCTGGGGAACGGGAACTAGTGACAAATACAGCAGCGCCATCCCTGGCAGCCCCAACTCCTGATGGTGACTATGCAGTTGGACTCGAACAACTAGTTTCGATGTTTAAGGATCAGAACGTTCTTGCTTTGCAACACTATGGAGGGGTTAGGGGCTTAGCGGATATACTAAAATCAAATCCGGAGAAAGGCATTAGTGGAAGTGATATTGATCTATCAAAAAGGAAAATAGCATTTGGAACTAATACATATCCTCGGAAAAAGGGCAGAAGTTTCTGGAGGTTTCTTTGGGAATCTTGGCAAGATCTGACGCTTATAATATTGATTATAGCAGCTGTGGTATCATTGGCACTTGGAATAAAAACAGAGGGTTTGGAACATGGATGGTATGACGGTGGGAGCATTACTTTCGCAGTTTTTCTTGTCATTATAGTTACAGCCGTCAGTGATTATCGGCAATCTCTCCAGTTTAAGAACTTGAACGCAGAAAAACAAAATATACAATTGGAGGTCACTAGAGGCGGTAGAACAATAAAATTATCCATATTTGATATTGTTGTTGGTGATGTAGTACCTCTTAAAATAGGTGATCAGGTTCCTGCTGATGGAGTTTTAATCACTGGTCACTCACTTGCCATTGATGAATCGAGTATGACTGGTGAAAGCAAAATTGTTCAGAAGGATCACAAGGCACCATTTTTGATGTCCGGTTGCAAAGTAGCAGATGGAGTTGGTACTATGCTGGTAACAGGTGTTGGCATTAACACTGAATGGGGACTGTTGATGGCAAGTATCTCAGAGGATAATGGGGAAGAGACTCCGTTACAGGTACGTTTGAATGGAGTAGCAACGTTTGTTGGCATAGTTGGGCTTACTGTCGCCGTTTCTGTTCTTGCAGTCCTCTTGGGAAGATACTTCTCTGGCAATACAAAAGATGTAGACGGACAAGTGCAATTTGTAGCGGGAAAGACTAGTATTAGTGATGCAGTTGACGGGGTCATCAAACTCTTTACCATTGCAGTTACAATTGTTGTTGTTGCAGTGCCTGAAGGTCTACCTTTGGCAGTTACCTTAACGGTAATTTGTATTTTGTTGGTGATATATAGCCTGGCCTTCTCTATGCGGAAAATGATGGCAGACAAAGCATTGGTTCGAAGGCTATCAGCATGTGAAACTATGGGCTCCGCCACAACAATTTGTAGTGATAAGACCGGAACTTTGACCTTGAATCAGATGACTGTAGTTGAGGCATATGCTGGGAGGAAGAAACAAGATCCACCCGATGACTCGTCGAAGTTGCATCCAGAAGTTCTATCCCTCATAAATGAAGGCATTGCACAGAATACTACGGGCAATGTTTTTGTGCCTAAGGATGGTGGAGAGGCAGAGATTTCAGGATCTCCAACCGAGAAGGCAATTCTTTCTTGGGCCGTGAAGTTGGGGATGAATTTTGATCTTACCAGATCAAATTCGACAGTTCTCCACGTCTTCCCCTTCAATTCTGAGAAAAAGCGAGGTGGTGTTGCTCTAAAGATGGGGGTTTCTGGAGTACATATACATTGGAAAGGAGCTGCAGAAATAGTTCTAGGAGCCTGCACTCAATATCTTGATTCAAATGGTCAGTTGCAATCTATTGAAAAAGACAAGGTATTCTTCACGGAGGCCATTGAAGACATGGCTGTCCAGAGCTTGCGCTGTGTGGCCATTGCGTACAGACCATACGAATTGGACAAAGTTCCCTCTAAGCAAGAGGATTTAGACAAGTGGTCCTTGCCAGAACAGGAGCTTATTTTGCTTGCTATTGTTGGGATAAAGGATCCTTGTCGGCCCGGAGTGAAAGAAGCTGTAAGACTATGCTCTCAAGCAGGTGTTAAGGTACGGATGGTTACGGGGGATAATCTGAATACAGCAAAGGCAATAGCTTTGGAGTGTGGAATACTGAGTTCAAAGGAAGAGGCGGTGGAGCCAAATATAATTGAAGGGAAGACATTCCGTGAACTATCTGAAATAGAAAGGGAACAAGTTGCTAAGAAAATAACGGTGATGGGGAGGTCTTCTCCTAATGACAAGCTTTTGCTCGTGCAAGCGCTGCGTAAATTGGGTGAAGTTGTTGCAGTCACAGGGGATGGCACCAATGATGCTCCTGCACTTCATGAGGCAGATATTGGTCTTTCTATGGGCATCCAAGGAACTGAAGTTGCAAAAGAAAGCTCCGATATTATAATTCTTGATGATAACTTTGCATCAGTAGTTAAGGTTGTTCGATGGGGCCGTTCAGTATATGCGAATATTCAAAAATTCATTCAGTTCCAACTCACTGTTAACGTTGCTGCTCTTGTAATAAATGTTGTGGCCGCCGTATCTGCTGGTGAAGTTCCTTTAAATGCAGTACAGCTTTTGTGGGTCAACCTGATCATGGACACTCTTGGAGCCCTTGCACTAGCTACGGAACCACCAACTGACAGCCTTATGCGCAGATCACCAGTTGGCCGAAGGGAATCTCTTATAACTAATGTCATGTGGAGGAACTTGGTCATACAGGCTGTCTATCAAGTGACCATTCTTCTCATTCTTAATTTCGGTTGGCAAAGTATTAATTTAGGTGATGATCAAGATTCTAAATCTCACTCCTTACAAGTGAAGAATACTTTAATATTCAACACATTCGTTCTATGCCAAATATTTAACGAGTTCAATGCTAGAAAAATAGATCAAATGAATGTTTTCAAAGGAGTGACTAAGAATCGTCTCTTCATGGGAATTGTTGGAATGACATTTGTGCTTCAGATACTAATCATCGAGTTTCTCGGAAAATTCACCTCAACAGTGCGCCTTGACTGGAAACTTTGGTTATTTTCTCTTGGTATTGGGATAATCAGTTGGAAAACTAATTCCAGTTCCGAAAACACCATGGTCACGGACCTTAAAGAAGCATATCAGACGACTCAAGAAGTCTCGTACTACTGCTGCTGCGCAACCACAATAGATACGAGAGAGAACTGGCTAGTCATAGTTAGCATCCACCAACCACTCTCCTTCAATTCATAG 3384 0.4353 MARSTSRGSNSSPNGLLTVTIAGGRHDHVDPASNNEEEEDDELVDPDDPFDVIHTKNVPLQTLKRWRQAALVLNASRRFRYTLDLKKEEEKEQKKSMIRAHAQVIRAALLFRLAGERELVTNTAAPSLAAPTPDGDYAVGLEQLVSMFKDQNVLALQHYGGVRGLADILKSNPEKGISGSDIDLSKRKIAFGTNTYPRKKGRSFWRFLWESWQDLTLIILIIAAVVSLALGIKTEGLEHGWYDGGSITFAVFLVIIVTAVSDYRQSLQFKNLNAEKQNIQLEVTRGGRTIKLSIFDIVVGDVVPLKIGDQVPADGVLITGHSLAIDESSMTGESKIVQKDHKAPFLMSGCKVADGVGTMLVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFVGIVGLTVAVSVLAVLLGRYFSGNTKDVDGQVQFVAGKTSISDAVDGVIKLFTIAVTIVVVAVPEGLPLAVTLTVICILLVIYSLAFSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYAGRKKQDPPDDSSKLHPEVLSLINEGIAQNTTGNVFVPKDGGEAEISGSPTEKAILSWAVKLGMNFDLTRSNSTVLHVFPFNSEKKRGGVALKMGVSGVHIHWKGAAEIVLGACTQYLDSNGQLQSIEKDKVFFTEAIEDMAVQSLRCVAIAYRPYELDKVPSKQEDLDKWSLPEQELILLAIVGIKDPCRPGVKEAVRLCSQAGVKVRMVTGDNLNTAKAIALECGILSSKEEAVEPNIIEGKTFRELSEIEREQVAKKITVMGRSSPNDKLLLVQALRKLGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSAGEVPLNAVQLLWVNLIMDTLGALALATEPPTDSLMRRSPVGRRESLITNVMWRNLVIQAVYQVTILLILNFGWQSINLGDDQDSKSHSLQVKNTLIFNTFVLCQIFNEFNARKIDQMNVFKGVTKNRLFMGIVGMTFVLQILIIEFLGKFTSTVRLDWKLWLFSLGIGIISWKTNSSSENTMVTDLKEAYQTTQEVSYYCCCATTIDTRENWLVIVSIHQPLSFNS* 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0003 1127 SFLD C1.7: P-type atpase like 494 871 - -
Ahy18g0003 1127 MobiDBLite consensus disorder prediction 1 18 - -
Ahy18g0003 1127 Gene3D - 60 112 - -
Ahy18g0003 1127 PANTHER CATION TRANSPORTING ATPASE 47 1074 - -
Ahy18g0003 1127 ProSitePatterns E1-E2 ATPases phosphorylation site. 514 520 IPR018303 -
Ahy18g0003 1127 SUPERFAMILY Calcium ATPase, transmembrane domain M 158 1073 IPR023298 -
Ahy18g0003 1127 SUPERFAMILY HAD-like 510 924 IPR036412 -
Ahy18g0003 1127 Pfam Cation transporter/ATPase, N-terminus 158 227 IPR004014 -
Ahy18g0003 1127 Gene3D - 210 1071 - -
Ahy18g0003 1127 Pfam haloacid dehalogenase-like hydrolase 509 833 - -
Ahy18g0003 1127 Pfam Cation transporting ATPase, C-terminus 904 1073 IPR006068 -
Ahy18g0003 1127 Pfam Ca2+-ATPase N terminal autoinhibitory domain 47 90 IPR024750 GO:0005516
Ahy18g0003 1127 PANTHER CALCIUM-TRANSPORTING ATPASE 47 1074 - -
Ahy18g0003 1127 Gene3D - 509 864 IPR023214 -
Ahy18g0003 1127 CDD P-type_ATPase_Ca_PMCA-like 184 952 - -
Ahy18g0003 1127 Pfam E1-E2 ATPase 279 473 - -
Ahy18g0003 1127 Gene3D - 522 719 IPR023299 GO:0000166
Ahy18g0003 1127 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 519 716 IPR023299 GO:0000166
Ahy18g0003 1127 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 786 899 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy18g0003 1127 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 154 1072 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Ahy18g0003 1127 MobiDBLite consensus disorder prediction 1 49 - -
Ahy18g0003 1127 PRINTS P-type cation-transporting ATPase superfamily signature 819 838 - -
Ahy18g0003 1127 PRINTS P-type cation-transporting ATPase superfamily signature 326 340 - -
Ahy18g0003 1127 PRINTS P-type cation-transporting ATPase superfamily signature 512 526 - -
Ahy18g0003 1127 PRINTS P-type cation-transporting ATPase superfamily signature 734 744 - -
Ahy18g0003 1127 PRINTS P-type cation-transporting ATPase superfamily signature 712 723 - -
Ahy18g0003 1127 PRINTS P-type cation-transporting ATPase superfamily signature 843 855 - -
Ahy18g0003 1127 Gene3D - 184 378 - -
Ahy18g0003 1127 SMART Cation_ATPase_N_a_2 156 232 IPR004014 -
Ahy18g0003 1127 SUPERFAMILY Calcium ATPase, transduction domain A 280 375 IPR008250 -
Ahy18g0003 1127 SFLD p-type atpase 494 871 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0003 Ahy-Chr18 56489 73235 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0003 9 1073 Primary Pumps ATPases AT3G21180 74.719 0.0 1585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0003 K01537 - gmx:100817367 1702.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0003 18 56489 73235 Ahy18g0003 18 56489 73235 ECH