Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy18g0003 | ATGGCCCGCTCTACCTCGCGGGGTTCCAACTCCTCTCCCAATGGCCTCCTCACAGTTACCATCGCTGGCGGCCGCCATGACCACGTGGACCCCGCTTCGAACAACGAAGAAGAAGAAGACGATGAACTAGTGGATCCCGATGATCCTTTTGACGTTATCCACACCAAGAACGTCCCGCTCCAGACGCTCAAGCGTTGGAGACAAGCAGCATTGGTTCTGAATGCCTCCAGGCGTTTTAGATATACTTTGGACTTGAAAAAGGAAGAGGAGAAAGAGCAAAAGAAAAGCATGATTAGAGCCCATGCACAAGTCATAAGAGCAGCTTTGCTTTTCAGATTGGCTGGGGAACGGGAACTAGTGACAAATACAGCAGCGCCATCCCTGGCAGCCCCAACTCCTGATGGTGACTATGCAGTTGGACTCGAACAACTAGTTTCGATGTTTAAGGATCAGAACGTTCTTGCTTTGCAACACTATGGAGGGGTTAGGGGCTTAGCGGATATACTAAAATCAAATCCGGAGAAAGGCATTAGTGGAAGTGATATTGATCTATCAAAAAGGAAAATAGCATTTGGAACTAATACATATCCTCGGAAAAAGGGCAGAAGTTTCTGGAGGTTTCTTTGGGAATCTTGGCAAGATCTGACGCTTATAATATTGATTATAGCAGCTGTGGTATCATTGGCACTTGGAATAAAAACAGAGGGTTTGGAACATGGATGGTATGACGGTGGGAGCATTACTTTCGCAGTTTTTCTTGTCATTATAGTTACAGCCGTCAGTGATTATCGGCAATCTCTCCAGTTTAAGAACTTGAACGCAGAAAAACAAAATATACAATTGGAGGTCACTAGAGGCGGTAGAACAATAAAATTATCCATATTTGATATTGTTGTTGGTGATGTAGTACCTCTTAAAATAGGTGATCAGGTTCCTGCTGATGGAGTTTTAATCACTGGTCACTCACTTGCCATTGATGAATCGAGTATGACTGGTGAAAGCAAAATTGTTCAGAAGGATCACAAGGCACCATTTTTGATGTCCGGTTGCAAAGTAGCAGATGGAGTTGGTACTATGCTGGTAACAGGTGTTGGCATTAACACTGAATGGGGACTGTTGATGGCAAGTATCTCAGAGGATAATGGGGAAGAGACTCCGTTACAGGTACGTTTGAATGGAGTAGCAACGTTTGTTGGCATAGTTGGGCTTACTGTCGCCGTTTCTGTTCTTGCAGTCCTCTTGGGAAGATACTTCTCTGGCAATACAAAAGATGTAGACGGACAAGTGCAATTTGTAGCGGGAAAGACTAGTATTAGTGATGCAGTTGACGGGGTCATCAAACTCTTTACCATTGCAGTTACAATTGTTGTTGTTGCAGTGCCTGAAGGTCTACCTTTGGCAGTTACCTTAACGGTAATTTGTATTTTGTTGGTGATATATAGCCTGGCCTTCTCTATGCGGAAAATGATGGCAGACAAAGCATTGGTTCGAAGGCTATCAGCATGTGAAACTATGGGCTCCGCCACAACAATTTGTAGTGATAAGACCGGAACTTTGACCTTGAATCAGATGACTGTAGTTGAGGCATATGCTGGGAGGAAGAAACAAGATCCACCCGATGACTCGTCGAAGTTGCATCCAGAAGTTCTATCCCTCATAAATGAAGGCATTGCACAGAATACTACGGGCAATGTTTTTGTGCCTAAGGATGGTGGAGAGGCAGAGATTTCAGGATCTCCAACCGAGAAGGCAATTCTTTCTTGGGCCGTGAAGTTGGGGATGAATTTTGATCTTACCAGATCAAATTCGACAGTTCTCCACGTCTTCCCCTTCAATTCTGAGAAAAAGCGAGGTGGTGTTGCTCTAAAGATGGGGGTTTCTGGAGTACATATACATTGGAAAGGAGCTGCAGAAATAGTTCTAGGAGCCTGCACTCAATATCTTGATTCAAATGGTCAGTTGCAATCTATTGAAAAAGACAAGGTATTCTTCACGGAGGCCATTGAAGACATGGCTGTCCAGAGCTTGCGCTGTGTGGCCATTGCGTACAGACCATACGAATTGGACAAAGTTCCCTCTAAGCAAGAGGATTTAGACAAGTGGTCCTTGCCAGAACAGGAGCTTATTTTGCTTGCTATTGTTGGGATAAAGGATCCTTGTCGGCCCGGAGTGAAAGAAGCTGTAAGACTATGCTCTCAAGCAGGTGTTAAGGTACGGATGGTTACGGGGGATAATCTGAATACAGCAAAGGCAATAGCTTTGGAGTGTGGAATACTGAGTTCAAAGGAAGAGGCGGTGGAGCCAAATATAATTGAAGGGAAGACATTCCGTGAACTATCTGAAATAGAAAGGGAACAAGTTGCTAAGAAAATAACGGTGATGGGGAGGTCTTCTCCTAATGACAAGCTTTTGCTCGTGCAAGCGCTGCGTAAATTGGGTGAAGTTGTTGCAGTCACAGGGGATGGCACCAATGATGCTCCTGCACTTCATGAGGCAGATATTGGTCTTTCTATGGGCATCCAAGGAACTGAAGTTGCAAAAGAAAGCTCCGATATTATAATTCTTGATGATAACTTTGCATCAGTAGTTAAGGTTGTTCGATGGGGCCGTTCAGTATATGCGAATATTCAAAAATTCATTCAGTTCCAACTCACTGTTAACGTTGCTGCTCTTGTAATAAATGTTGTGGCCGCCGTATCTGCTGGTGAAGTTCCTTTAAATGCAGTACAGCTTTTGTGGGTCAACCTGATCATGGACACTCTTGGAGCCCTTGCACTAGCTACGGAACCACCAACTGACAGCCTTATGCGCAGATCACCAGTTGGCCGAAGGGAATCTCTTATAACTAATGTCATGTGGAGGAACTTGGTCATACAGGCTGTCTATCAAGTGACCATTCTTCTCATTCTTAATTTCGGTTGGCAAAGTATTAATTTAGGTGATGATCAAGATTCTAAATCTCACTCCTTACAAGTGAAGAATACTTTAATATTCAACACATTCGTTCTATGCCAAATATTTAACGAGTTCAATGCTAGAAAAATAGATCAAATGAATGTTTTCAAAGGAGTGACTAAGAATCGTCTCTTCATGGGAATTGTTGGAATGACATTTGTGCTTCAGATACTAATCATCGAGTTTCTCGGAAAATTCACCTCAACAGTGCGCCTTGACTGGAAACTTTGGTTATTTTCTCTTGGTATTGGGATAATCAGTTGGAAAACTAATTCCAGTTCCGAAAACACCATGGTCACGGACCTTAAAGAAGCATATCAGACGACTCAAGAAGTCTCGTACTACTGCTGCTGCGCAACCACAATAGATACGAGAGAGAACTGGCTAGTCATAGTTAGCATCCACCAACCACTCTCCTTCAATTCATAG | 3384 | 0.4353 | MARSTSRGSNSSPNGLLTVTIAGGRHDHVDPASNNEEEEDDELVDPDDPFDVIHTKNVPLQTLKRWRQAALVLNASRRFRYTLDLKKEEEKEQKKSMIRAHAQVIRAALLFRLAGERELVTNTAAPSLAAPTPDGDYAVGLEQLVSMFKDQNVLALQHYGGVRGLADILKSNPEKGISGSDIDLSKRKIAFGTNTYPRKKGRSFWRFLWESWQDLTLIILIIAAVVSLALGIKTEGLEHGWYDGGSITFAVFLVIIVTAVSDYRQSLQFKNLNAEKQNIQLEVTRGGRTIKLSIFDIVVGDVVPLKIGDQVPADGVLITGHSLAIDESSMTGESKIVQKDHKAPFLMSGCKVADGVGTMLVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFVGIVGLTVAVSVLAVLLGRYFSGNTKDVDGQVQFVAGKTSISDAVDGVIKLFTIAVTIVVVAVPEGLPLAVTLTVICILLVIYSLAFSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYAGRKKQDPPDDSSKLHPEVLSLINEGIAQNTTGNVFVPKDGGEAEISGSPTEKAILSWAVKLGMNFDLTRSNSTVLHVFPFNSEKKRGGVALKMGVSGVHIHWKGAAEIVLGACTQYLDSNGQLQSIEKDKVFFTEAIEDMAVQSLRCVAIAYRPYELDKVPSKQEDLDKWSLPEQELILLAIVGIKDPCRPGVKEAVRLCSQAGVKVRMVTGDNLNTAKAIALECGILSSKEEAVEPNIIEGKTFRELSEIEREQVAKKITVMGRSSPNDKLLLVQALRKLGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSAGEVPLNAVQLLWVNLIMDTLGALALATEPPTDSLMRRSPVGRRESLITNVMWRNLVIQAVYQVTILLILNFGWQSINLGDDQDSKSHSLQVKNTLIFNTFVLCQIFNEFNARKIDQMNVFKGVTKNRLFMGIVGMTFVLQILIIEFLGKFTSTVRLDWKLWLFSLGIGIISWKTNSSSENTMVTDLKEAYQTTQEVSYYCCCATTIDTRENWLVIVSIHQPLSFNS* | 1128 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy18g0003 | 1127 | SFLD | C1.7: P-type atpase like | 494 | 871 | - | - | |
Ahy18g0003 | 1127 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Ahy18g0003 | 1127 | Gene3D | - | 60 | 112 | - | - | |
Ahy18g0003 | 1127 | PANTHER | CATION TRANSPORTING ATPASE | 47 | 1074 | - | - | |
Ahy18g0003 | 1127 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 514 | 520 | IPR018303 | - | |
Ahy18g0003 | 1127 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 158 | 1073 | IPR023298 | - | |
Ahy18g0003 | 1127 | SUPERFAMILY | HAD-like | 510 | 924 | IPR036412 | - | |
Ahy18g0003 | 1127 | Pfam | Cation transporter/ATPase, N-terminus | 158 | 227 | IPR004014 | - | |
Ahy18g0003 | 1127 | Gene3D | - | 210 | 1071 | - | - | |
Ahy18g0003 | 1127 | Pfam | haloacid dehalogenase-like hydrolase | 509 | 833 | - | - | |
Ahy18g0003 | 1127 | Pfam | Cation transporting ATPase, C-terminus | 904 | 1073 | IPR006068 | - | |
Ahy18g0003 | 1127 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 47 | 90 | IPR024750 | GO:0005516 | |
Ahy18g0003 | 1127 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 47 | 1074 | - | - | |
Ahy18g0003 | 1127 | Gene3D | - | 509 | 864 | IPR023214 | - | |
Ahy18g0003 | 1127 | CDD | P-type_ATPase_Ca_PMCA-like | 184 | 952 | - | - | |
Ahy18g0003 | 1127 | Pfam | E1-E2 ATPase | 279 | 473 | - | - | |
Ahy18g0003 | 1127 | Gene3D | - | 522 | 719 | IPR023299 | GO:0000166 | |
Ahy18g0003 | 1127 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 519 | 716 | IPR023299 | GO:0000166 | |
Ahy18g0003 | 1127 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 786 | 899 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Ahy18g0003 | 1127 | TIGRFAM | ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type | 154 | 1072 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
Ahy18g0003 | 1127 | MobiDBLite | consensus disorder prediction | 1 | 49 | - | - | |
Ahy18g0003 | 1127 | PRINTS | P-type cation-transporting ATPase superfamily signature | 819 | 838 | - | - | |
Ahy18g0003 | 1127 | PRINTS | P-type cation-transporting ATPase superfamily signature | 326 | 340 | - | - | |
Ahy18g0003 | 1127 | PRINTS | P-type cation-transporting ATPase superfamily signature | 512 | 526 | - | - | |
Ahy18g0003 | 1127 | PRINTS | P-type cation-transporting ATPase superfamily signature | 734 | 744 | - | - | |
Ahy18g0003 | 1127 | PRINTS | P-type cation-transporting ATPase superfamily signature | 712 | 723 | - | - | |
Ahy18g0003 | 1127 | PRINTS | P-type cation-transporting ATPase superfamily signature | 843 | 855 | - | - | |
Ahy18g0003 | 1127 | Gene3D | - | 184 | 378 | - | - | |
Ahy18g0003 | 1127 | SMART | Cation_ATPase_N_a_2 | 156 | 232 | IPR004014 | - | |
Ahy18g0003 | 1127 | SUPERFAMILY | Calcium ATPase, transduction domain A | 280 | 375 | IPR008250 | - | |
Ahy18g0003 | 1127 | SFLD | p-type atpase | 494 | 871 | IPR044492 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy18g0003 | Ahy-Chr18 | 56489 | 73235 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy18g0003 | 9 | 1073 | Primary Pumps ATPases | AT3G21180 | 74.719 | 0.0 | 1585 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy18g0003 | K01537 | - | gmx:100817367 | 1702.95 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy18g0003 | 18 | 56489 | 73235 | Ahy18g0003 | 18 | 56489 | 73235 | ECH |