Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0001 ATGGCCCGCTCTACCTCGCGGGGTTCCAACTCCTCTCCCAATGGCCTCCTCACAGTTACCATCGCTGGCGGCCGCCATGACCACGTGGACCCCGCTTCGAACAACGAAGAAGAAGAAGACGATGAACTAGTGGATCCCGATGATCCTTTTGACGTTATCCACACCAAGAACGTCCCGCTCCAGACGCTCAAGCGTTGGAGACAAGCAGCATTGGTTCTGAATGCCTCCAGGCGTTTTAGATATACTTTGGACTTGAAAAAGGAAGAGGAGAAAGAGCAAAAGAAAAGCATGATTAGAGCCCATGCACAAGTCATAAGAGCAGCTTTGCTTTTCAGATTGGCTGGGGAACGGGAACTAGTGACAAATACAGCAGCGCCATCCCTGGCAGCCCCAACTCCTGATGGTGACTATGCAGTTGGACTCGAACAACTAGTTTCGATGTTTAAGGATCAGAACGTTCTTGCTTTGCAACACTATGGAGGGGTTAGGGGCTTAGCGGATATACTAAAATCAAATCCGGAGAAAGGCATTAGTGGAAGTGATATTGATCTATCAAAAAGGAAAATAGCATTTGGAACTAATACATATCCTCGGAAAAAGGGCAGAAGTTTCTGGAGGTTTCTTTGGGAATCTTGGCAAGATCTGACGCTTATAATATTGATTATAGCAGCTGTGGTATCATTGGCACTTGGAATAAAAACAGAGCAAAACCTATTGGAATGA 723 0.4633 MARSTSRGSNSSPNGLLTVTIAGGRHDHVDPASNNEEEEDDELVDPDDPFDVIHTKNVPLQTLKRWRQAALVLNASRRFRYTLDLKKEEEKEQKKSMIRAHAQVIRAALLFRLAGERELVTNTAAPSLAAPTPDGDYAVGLEQLVSMFKDQNVLALQHYGGVRGLADILKSNPEKGISGSDIDLSKRKIAFGTNTYPRKKGRSFWRFLWESWQDLTLIILIIAAVVSLALGIKTEQNLLE* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0001 240 Pfam Ca2+-ATPase N terminal autoinhibitory domain 47 90 IPR024750 GO:0005516
Ahy18g0001 240 PANTHER - 45 235 IPR000528 GO:0006869|GO:0008289
Ahy18g0001 240 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 45 235 - -
Ahy18g0001 240 MobiDBLite consensus disorder prediction 1 49 - -
Ahy18g0001 240 Gene3D - 60 112 - -
Ahy18g0001 240 SUPERFAMILY Calcium ATPase, transmembrane domain M 158 234 IPR023298 -
Ahy18g0001 240 SMART Cation_ATPase_N_a_2 156 232 IPR004014 -
Ahy18g0001 240 MobiDBLite consensus disorder prediction 1 18 - -
Ahy18g0001 240 Pfam Cation transporter/ATPase, N-terminus 158 227 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0001 Ahy-Chr18 12861 18013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0001 9 235 Primary Pumps ATPases AT3G21180 60.435 4.11e-84 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0001 K01537 - ahf:112703833 430.254