Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3254 ATGGCTATCATCAATATATCAACATTAATATTTTTTCTCCTATTGTCGATAAAGCTTTCATGTTCAACAAGAAACCATAGCATTCTAATCCAAGGTTCATCAATGTCAGTAGATGAACCAAACGACGTTATAGTGTCACCCAAGGGCACGTTTTCTGCTGGCTTCTACGCGATTGGCGAAAACGCTTATTGCTTTGGCGTTTGGTTTTCCCGAAACCCTACTCTTGTATGGATGGCAAATCGTGACGACCCAGTCAACGGAAAGAAATCAAAGCTCTCCCTACTCGCCAATGGTAACCTTGTTCTAGTGGATGCCGATAATTCCCATGTTTGGTCAACAGACACAGTTTCATCGCCGTCTTCTACCGTGCATTTGGTTCTGTATGACACCGGCAACCTTGTTCTAACGGAGGAGGACGGTGACGGCAACAACAACAACATGAACAGCACCGTGTTGTGGCAAAGCTTTGATTTCCCTACGGATACTCTTCTTCCTGAGCAAGTGTTCGCCCGATTCACCAAAGTAATCTCTTCGAAAAGTCAGACAAACAAGTCCACTGGTTTGTACACGTTGTTTTTCGACAACGATAACGTTCTTCGTCTTGTTTACAATGGCCCCGAAGTTTCAGGGATCTACTGGCCAGATCCTTGGAATCTGAACTGGGCCAACTTCAGGAGTAGTTACAACAGCAGCAGAGTTGCTGTCTTGGACACTCTTGGCACCTTCATTTCCTCAGATAATTTCACTTTCACCACTTCCGATCACGGTTCCGTCATCCAGCGAAGGTTGACCCTTGATCCTAATGGAAACCTTCGTGTTTATAGCCGTAGCAGTGATCAAGATGACTGGTATGTTTCGTGGCAAGCATATGCAAGACCATGCAGGATCCATGGCGTTTGTGGGCCCAATAGTTTGTGCACTTACCATACTGATTCTGCCATTAAATGCTCTTGCCTTCCCGGTCATAAGATGAAGTATTCAAATGATTGGTCTTACGGCTGCGAACCCAGATTTTCTGTATCTTGCAAGAACAATGAAAGTGGGTCGTCGTCACAGTTCTTATCTATAAGCAACGTGGAGTTGTATGGCTATGATTATGGACTCATGACAAATTACACATTAGATCAGTGTAAGGAGTTCTGCCTCCAACTATGCGATTGCAAAGGCGTTCAGTACACTTATAACAAGGCCTCTGGTACCAACAATTGTTATGTCAAGGTTCAGTTGCGGAATGCATATCGAATCCCATATTTTAATGCTGAATTTCTTTTGAAACTGCCGGTCAATAGTACCTATTCTTTTCAAGATGATCAAGTTTCAATCGTTGATAGACACAACAATCTTGATTGTCCTGTGGGTGCAGAAACAATACAACTTGAGAGGATTTATATCAAAGGGCAGGTGAGCAGATATGTTAAGTTCTTGTTATGGTTCGCTGGAGGAGTTGGGATATTTGAAATGCTGTGCATATTTGTGGTTTGGTACTTTTTGGTAAGGTTTAGGGTGCATTCTGGTGCAGATGAACGAGTGTATGACTTAGGCTTTGCAGGGTTTAGGAGATTCAGTTACTCTGAACTGAAACAAGCCACCAAAGGGTTTAGCCAAGAGATTGGAAAGGGTGCATGGGGGATTGTATACAAAGGTGTACTCTCTGATGGAAGAGTGGTGGCCGTGAAGAGACTCATGGAAGCGAATCAAGGAGAAGAGGAGTTCCTTGCTGAAGTGAGCAGCATTGGAAGGCTCAATCACATGAACTTGATTGAGATGTGGGGATACTGTGCTGAAGGGAAACACAGGCTCCTGGTTTATGAGCACATGGAGCATGGTTCTCTTGCTCAGAATCTTAGGACAAATAGATTGGATTGGTCCAAAAGGTTTGAGATTGCGTTGGGTACAGCCAAAGGTTTGTCTTATCTTCATGATGAGTGTTTGGATTGGATTTTGCATTGTGATGTAAAGCCACAGAACATTCTTCTTGATTCTAATTTTCAACCCAAGGTAGCTGATTTTGGATTGTCCAAGTTGCTTAAAAGAAGTGACACTAATAAGTACTCTAGCTTTTCCAAGATACGAGGAACAAGAGGATACATGGCTCCTGAGTGGGTTTTGAACCTCCCAATAACCTCCAAGGTTGATGTTTATAGCTATGGAATTGTTGTGTTGGAAATGTTCACTGGAAAGAGCGCAACCAAGAACCTTGGGATTAGTAGTGATGGAGTAGAGAATAATCAACATATGTACCTGGTTGCATGGCTGAGAGAGAAACAGAATATGGGATTTCGTTGTGGTTGGGTTAGTGAAATCTTAGACCCCACCATAGAAGGTGATTATGATGAAAATAAGTTGGAAGCTTTGGCTAGAGTTGCTTTGCAATGTGTAGAGGATGAGAGGGACAAAAGACCCACCATGAGCCAAGTGGTAGAGATGCTTCAGAAATATTTATAA 2445 0.429 MAIINISTLIFFLLLSIKLSCSTRNHSILIQGSSMSVDEPNDVIVSPKGTFSAGFYAIGENAYCFGVWFSRNPTLVWMANRDDPVNGKKSKLSLLANGNLVLVDADNSHVWSTDTVSSPSSTVHLVLYDTGNLVLTEEDGDGNNNNMNSTVLWQSFDFPTDTLLPEQVFARFTKVISSKSQTNKSTGLYTLFFDNDNVLRLVYNGPEVSGIYWPDPWNLNWANFRSSYNSSRVAVLDTLGTFISSDNFTFTTSDHGSVIQRRLTLDPNGNLRVYSRSSDQDDWYVSWQAYARPCRIHGVCGPNSLCTYHTDSAIKCSCLPGHKMKYSNDWSYGCEPRFSVSCKNNESGSSSQFLSISNVELYGYDYGLMTNYTLDQCKEFCLQLCDCKGVQYTYNKASGTNNCYVKVQLRNAYRIPYFNAEFLLKLPVNSTYSFQDDQVSIVDRHNNLDCPVGAETIQLERIYIKGQVSRYVKFLLWFAGGVGIFEMLCIFVVWYFLVRFRVHSGADERVYDLGFAGFRRFSYSELKQATKGFSQEIGKGAWGIVYKGVLSDGRVVAVKRLMEANQGEEEFLAEVSSIGRLNHMNLIEMWGYCAEGKHRLLVYEHMEHGSLAQNLRTNRLDWSKRFEIALGTAKGLSYLHDECLDWILHCDVKPQNILLDSNFQPKVADFGLSKLLKRSDTNKYSSFSKIRGTRGYMAPEWVLNLPITSKVDVYSYGIVVLEMFTGKSATKNLGISSDGVENNQHMYLVAWLREKQNMGFRCGWVSEILDPTIEGDYDENKLEALARVALQCVEDERDKRPTMSQVVEMLQKYL* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3254 814 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 177 IPR036426 -
Ahy17g3254 814 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 5 812 - -
Ahy17g3254 814 SMART blect_4 35 159 IPR001480 -
Ahy17g3254 814 SMART serkin_6 531 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g3254 814 Pfam S-locus glycoprotein domain 223 325 IPR000858 GO:0048544
Ahy17g3254 814 Gene3D Phosphorylase Kinase; domain 1 504 605 - -
Ahy17g3254 814 SMART ntp_6 348 426 IPR003609 -
Ahy17g3254 814 ProSiteProfiles PAN/Apple domain profile. 342 422 IPR003609 -
Ahy17g3254 814 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 5 812 - -
Ahy17g3254 814 Pfam PAN-like domain 348 407 IPR003609 -
Ahy17g3254 814 Gene3D - 24 156 IPR036426 -
Ahy17g3254 814 Gene3D Transferase(Phosphotransferase) domain 1 606 814 - -
Ahy17g3254 814 ProSiteProfiles Protein kinase domain profile. 531 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g3254 814 SUPERFAMILY Protein kinase-like (PK-like) 514 810 IPR011009 -
Ahy17g3254 814 ProSiteProfiles Bulb-type lectin domain profile. 26 148 IPR001480 -
Ahy17g3254 814 Pfam D-mannose binding lectin 74 170 IPR001480 -
Ahy17g3254 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Ahy17g3254 814 CDD PAN_AP_plant 338 427 - -
Ahy17g3254 814 CDD B_lectin 44 159 IPR001480 -
Ahy17g3254 814 CDD STKc_IRAK 537 812 - -
Ahy17g3254 814 ProSitePatterns Protein kinases ATP-binding region signature. 537 559 IPR017441 GO:0005524
Ahy17g3254 814 PIRSF SRK 1 814 IPR024171 GO:0004674
Ahy17g3254 814 Pfam Protein kinase domain 534 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3254 Ahy-Chr17 134652221 134654854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3254 499 810 Receptor kinase-like Gene Family AT3G58690 40.606 1.94e-67 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Ahy17g3254 Pkinase 1.30E-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3254 - - gmx:100792388 1060.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3254 17 134652221 134654854 Ahy17g3254 17 134652221 134654854 ECH
Ahy17g3254 17 134652221 134654854 Ahy8g0972 8 18664995 18668707 hybridization